Job Description P77171 Confidence 61.67% Date Thu Jan 5 12:25:56 GMT 2012 Rank 279 Aligned Residues 169 % Identity 11% Template d1pb7a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.35

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		A	T	M	S	N	P	M	I	L	A	G	L	K	T	G	E	I	D	I	G	.	.	.	I	G	R	M	S	D	P	E	L	M	T	G	L	N	Y	E	L	L	F	L	E	S	L	K	L	V	V	R	P	N	H	P	L	L	Q	E	N	V	T	L	S	R	V	L	E	W	P	V	V	V	S	P	E	G	T	A	P
Query Conservation																						.	.	.
Alig confidence																						.	.	.
Template Conservation
Template Sequence		N	K	K	E	W	N	G	M	M	G	E	L	L	S	G	Q	A	D	M	I	V	A	P	L	T	I	N	N	E	R	A	Q	Y	I	E	F	S	K	P	F	K	Y	Q	G	L	T	I	L	V	K	K	G	T	R	I	T	G	I	N	D	P	R	L	R	N	P	S	D	K	F	I	Y	A	T	V	K	Q	S	S	V
Template Known Secondary structure		S														T	S		S				S	S		B							T	T					S		S											T	T					S	T	T						S		B	T	T	B					B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	H	S	D	A	L	V	Q	S	Q	G	C	K	I	P	S	G	C	I	E	T	L	S	A	S	L	S	R	Q	L	T	V	E	Y	D	Y	V	W	F	V	P	S	G	A	V	K	D	D	L	R	H	A	T	L	V	A	L	P	V	P	G	H	G	A	G	E	P	I	G	I	L	T	R	V	D	A	T	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	Y	F	R	R	Q	V	E	L	S	T	M	Y	R	H	M	E	K	H	N	Y	E	S	A	A	E	A	I	Q	A	V	R	D	N	K	L	H	A	F	I	W	D	S	A	V	L	E	F	E	A	S	Q	K	C	D	L	V	T	T	G	E	L	F	F	R	S	G	F	G	I	G	M	R	K	D	S	P	W	K
Template Known Secondary structure							T		G	G	G								T	T	T		B	S	S										T	T	S		S																	T	T					S	S		S											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		292	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	C	Q	L	M	I	N	A	I	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	V	S	L	S	I	L	K	S	H	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions