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Job DescriptionP77171
Confidence25.53%DateThu Jan 5 12:25:56 GMT 2012
Rank398Aligned Residues202
% Identity10%Templatec3muqB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140.........150.........160. ........170....
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Query Sequence  NDVVRVGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDP. . . . . ELMTGLNYELLFL
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Template Sequence  EHVRLATTTSTYHSGLLDYLLPQFEKDTG. YKVDVIAAGTGKALKXGENGDVDLVXTHAPKAEGTFVEKGYGVLPRKLXY
Template Known Secondary structure 
TGGGGT
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   27..30.........40.........50..... ....60.........70.........80.........90.........100.....
 
   175....180.........190.........200. ........210.........220....... ..230.........240.....
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Query Sequence  ESLKLVVRPNHPLLQENVTLSRVLEWP. . . . . . . VVVSPEGTAPRQHSDALVQSQGCKIP. . SGCIETLSASLSRQLTVE
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Template Sequence  NDFVIVGPKADPAKIKDDESVLDVFKEIANKNATFISRGDDSGTHKKEXGFWAQTKIEPNFGGYRSVGQGXGPTLNXASE
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   246...250.........260.........270.........280.........290. ........300..
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Query Sequence  YDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFS. . . . SGCQLMINAIR
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Template Sequence  XQGYTXSDRGTWLAYQNKLDLEILFQGDEKLFNPYQVILVNPERYPTINYQGAKAFSDWLV
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   186...190.........200.........210.........220.........230.........240......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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