Job Description P37774 Confidence 100.00% Date Thu Jan 5 11:57:41 GMT 2012 Rank 20 Aligned Residues 220 % Identity 40% Template c2pcjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	V	K	N	L	V	K	K	F	H	G	Q	T	V	L	H	G	I	D	L	E	V	K	P	G	E	V	V	A	I	I	G	P	S	G	S	G	K	T	T	L	L	R	S	I	N	L	L	E	Q	P	E	A	G	T	I	T	V	G	D	I	T	I	D	T	A	R	S	L	S	Q	Q	K	S	L	I	R	Q
Query Conservation
Alig confidence																																																																												.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		I	L	R	A	E	N	I	K	K	V	I	R	G	Y	E	I	L	K	G	I	S	L	S	V	K	K	G	E	F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	E	G	K	V	F	L	E	G	K	E	V	D	Y	T	N	E	K	E	L	S	.	.	.	.	L	L
Template Known Secondary structure													T	T													T	T									T	T	S										T	T	S	S			S							T	T					T	T							.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	H	V	G	F	V	F	Q	N	F	N	L	F	P	H	R	T	V	L	E	N	I	I	E	G	P	V	I	V	K	G	E	P	K	E	E	A	T	A	R	A	R	E	L	L	A	K	V	G	L	A	G	K	E	T	S	Y	P	R	R	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	A	M	R
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		R	N	R	K	L	G	F	V	F	Q	F	H	Y	L	I	P	E	L	T	A	L	E	N	V	I	V	.	P	M	L	K	M	G	K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	G	D	K	L	S	R	K	P	Y	E	L	S	G	G	E	Q	Q	R	V	A	I	A	R	A	L	A	N	E
Template Known Secondary structure											S	S					T	T	S									.					T	T																	T	T		T	T		T	T			G	G	G	S															T	T
Template Predicted Secondary structure																												.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	V	I	L	F	D	E	P	T	S	A	L	D	P	E	L	V	G	E	V	L	N	T	I	R	Q	L	A	Q	E	K	R	T	M	V	I	V	T	H	E	M	S	F	A	R	D	V	A	D	R	A	I	F	M	D	Q	G	R	I	V	E	Q	G	A	A
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		P	I	L	L	F	A	D	E	P	T	G	N	L	D	S	A	N	T	K	R	V	M	D	I	F	L	K	I	N	E	G	G	T	S	I	V	M	V	T	H	E	R	E	L	A	.	E	L	T	H	R	T	L	E	M	K	D	G	K	V	V	G	E	I	T	R
Template Known Secondary structure			S						S	T	T	T	T	S																		T	T								S						.	T	T	S	S							T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions