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Job DescriptionP37774
Confidence100.00%DateThu Jan 5 11:57:41 GMT 2012
Rank56Aligned Residues202
% Identity22%Templatec2iw3B_
PDB info PDB header:translationChain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  IEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQL
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Template Sequence  LCNCEFSLAYGAKILLNKTQLRLKRARRYGICGPNGCGKSTLXRAIANGQVDGFP. . . . . . . . . . . . . . . . . . . . . . TQE
Template Known Secondary structure  TTTT

STTSSTT
STT

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TT
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   430.........440.........450.........460.........470.........480.... ...
 
   84.....90... ......100.........110.........120.........130..... ....140.........150.........160.
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Query Sequence  RQHVGFVFQN. FNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA. GKETSYPRRLSGGQQQRVAIARALAM
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Template Sequence  ECRTVYVEHDIDGTHSDTSVLDFVFESGVGT. . . . . . . . KEAIKDKLIEFGFTDEXIAXPISALSGGWKXKLALARAVLR
Template Known Secondary structure  TS
TT






TTSBTT

S
........T

SBGGG

T
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   488.490.........500.........510........ .520.........530.........540.........550.........
 
   162.......170.........180.........190.........200.........210.........220..... ....230........
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Query Sequence  RPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQ. GAAKALFADPEQP
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Template Sequence  NADILLLDEPTNHLDTVNVAWLVNYLNTC. . . GITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAA
Template Known Secondary structure  T
SSTTTT

S...
S
S

STTS

GGG
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   560.........570.........580........ .590.........600.........610.........620.........630....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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