Job Description P37774 Confidence 98.57% Date Thu Jan 5 11:57:41 GMT 2012 Rank 90 Aligned Residues 159 % Identity 13% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																											.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	I	I	G	P	S	G	S	G	K	T	T	L	L	R	S	I	N	L	L	E	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	G	T	I	T	V	G	D	I	T	I	D	T	A	R	S	L	S	Q	Q	K	S	L	I	R	Q	L	R	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	E	L	G	C	S	P	N	P	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R	X	A	S	A	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S	S																							S		S	S	S			S				S	S	S				T	T																S	S	T	T		S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		86	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																																										.
Query SS confidence											.	.	.	.	.	.	.																																										.
Query Sequence		H	V	G	F	V	F	Q	N	F	.	.	.	.	.	.	.	N	L	F	P	H	R	T	V	L	E	N	I	I	E	G	P	V	I	V	K	G	E	P	K	E	E	A	T	A	R	A	R	E	L	L	A	K	V	G	L	A	.	G	K	E	T	S	Y	P	R	R	L	S	G	G	Q	Q	Q	R	V	A	I	A	R
Query Conservation											.	.	.	.	.	.	.																																										.
Alig confidence		.									.	.	.	.	.	.	.																																										.
Template Conservation		.
Template Sequence		.	L	I	H	V	V	D	A	T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G	V	N	E	N	D	V	W
Template Known Secondary structure		.							T	T			B		T	T	S		B		S																									T	T	T					S	T	T	T	S	S												T	G	G	G	T
Template Predicted Secondary structure		.
Template SS confidence
			105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	M	R	P	E	V	I	L	F	D	E	P	T	S	A	L	D	P	E	L	V	G	E	V	L	N	T	I	R	Q	L	A	Q	E	K	R	T	M	V	I	V	T	H	E
Query Conservation
Alig confidence																																		.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		E	A	X	H	K	L	N	L	P	E	D	P	T	K	W	S	Q	D	D	L	L	A	F	A	S	E	I	R	R	V	N	K	.	.	.	.	.	P	X	V	I	A	A	N	K	A
Template Known Secondary structure							T	T			S		G	G	G																		S	.	.	.	.	.									G
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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