Job Description P37774 Confidence 100.00% Date Thu Jan 5 11:57:41 GMT 2012 Rank 13 Aligned Residues 230 % Identity 36% Template c1q1bD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	K	N	L	V	K	K	F	H	G	Q	T	V	L	H	G	I	D	L	E	V	K	P	G	E	V	V	A	I	I	G	P	S	G	S	G	K	T	T	L	L	R	S	I	N	L	L	E	Q	P	E	A	G	T	I	T	V	G	D	I	T	I	D	T	A	R	S	L	S	Q	Q	K	S	L	I	R	Q	L
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	L	Q	N	V	T	K	A	W	G	E	V	V	V	S	K	D	I	N	L	D	I	H	E	G	E	F	V	V	F	V	G	P	S	G	C	G	K	S	T	L	L	R	M	I	A	G	L	E	T	I	T	S	G	D	L	F	I	G	E	K	R	M	N	D	T	P	P	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure												T	T													T	T								S	G	G	G	S								T	T	T	S	S				S	S					T	T				T	T			S	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.											.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	H	V	G	F	V	F	Q	N	F	N	L	F	P	H	R	T	V	L	E	N	I	I	E	G	P	V	I	V	K	G	E	P	K	E	E	A	T	A	R	A	R	E	L	L	A	K	V	G	L	A	G	K	E	T	S	Y	P	R	R	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	A	M	R	P
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		E	R	G	V	G	M	V	F	Q	S	Y	A	L	Y	P	H	L	S	V	A	E	N	M	S	F	G	.	L	K	L	A	G	A	K	K	E	V	I	N	Q	R	V	N	Q	V	A	E	V	L	Q	L	A	H	L	L	D	R	K	P	K	A	L	S	G	G	Q	R	Q	R	V	A	I	G	R	T	L	V	A	E	P
Template Known Secondary structure		T	T					B		S						T	T	S						T	T	T	T	.	T	T	S	S	S	S	T	T	T	T	T	T	T					T	T	G	G	G	T		T	T		S	S					G	G	G	T	T	T	S	S	S	S	T	T					T	T
Template Predicted Secondary structure																												.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	V	I	L	F	D	E	P	T	S	A	L	D	P	E	L	V	G	E	V	L	N	T	I	R	Q	L	.	A	Q	E	K	R	T	M	V	I	V	T	H	E	M	S	F	A	R	D	V	A	D	R	A	I	F	M	D	Q	G	R	I	V	E	Q	G	A	A	K	A	L	F	A	D	P	E	Q	P	R	T	R	Q
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		S	V	F	L	L	D	E	P	L	S	N	L	D	A	A	L	R	V	Q	M	R	I	E	I	S	R	L	H	K	R	L	G	R	T	M	I	Y	V	T	H	D	Q	V	E	A	M	T	L	A	D	K	I	V	V	L	D	A	G	R	V	A	Q	V	G	K	P	L	E	L	Y	H	Y	P	A	D	R	F	V	A	G
Template Known Secondary structure		S				B	S	S	T	T	T	T			T	T	T															T	T								S										S							T	T														S		S	B
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		243	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		233	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions