 |
| Job Description | P0ACF4 | | Confidence | 8.45% | Date | Thu Jan 5 11:18:03 GMT 2012 |
| Rank | 99 | Aligned Residues | 32 |
| % Identity | 13% | Template | d1rp3a2 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
| Resolution | 2.30 |
|
| | |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | |
|
|
|
| | | | | | | | | | | | | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | D | K | I | A | A | G | A | D | I | S | K | A | A | A | G | R | A | L | D | A | I | I | A | S | V | T | E | S | L | K | E |
| Query Conservation | |
| | |
|
| | | | | |
| | | |
| | |
|
| | |
| | | |
| | | |
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
| | |
| |
|
| | |
|
| | | | | |
|
| | | |
|
| | |
| | |
| Template Sequence | |
A | K | E | V | A | K | I | L | E | T | S | V | S | R | V | S | Q | L | K | A | K | A | L | E | R | L | R | E | M | L | S | N |
| Template Known Secondary structure | |
| | | | | | | T | T | S |
| | | | | | | | | | | | | | | | | | | | |
|
| Template Predicted Secondary structure | |
| | | | | | | |
|
|
| | | | | | | | | | | | | | | | | | | |
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
