Return to main results Retrieve Phyre Job Id

Job DescriptionP77499
Confidence94.86%DateThu Jan 5 12:30:01 GMT 2012
Rank467Aligned Residues44
% Identity27%Templatec3crqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60 .........70..
Predicted Secondary structure 















..








Query SS confidence 































. .











Query Sequence  VHAIMGPNGSGKSTLSATLAGREDYEVTGGTV. . EFKGKDLLALSP
Query Conservation     
 
  







  
 
        
 
..   
        
Alig confidence 































..











Template Conservation 

 
 







 

  

     






 



 
 





Template Sequence  AIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKP
Template Known Secondary structure 
STTSSTTS


TTTTBTT

TTTT

Template Predicted Secondary structure 




















Template SS confidence 













































   7..10.........20.........30.........40.........50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions