 |
| Job Description | P77499 | | Confidence | 94.72% | Date | Thu Jan 5 12:30:01 GMT 2012 |
| Rank | 481 | Aligned Residues | 33 |
| % Identity | 15% | Template | c3bbpA_ |
| PDB info |
PDB header:protein transport/splicing | Chain: A: PDB Molecule:ras-related protein rab-6a; |
PDBTitle: rab6-gtp:gcc185 rab binding domain complex
|
| Resolution | 3.00 Å |
|
| | |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
| Predicted Secondary structure | |
 | | | |  |
|
|
|
|
|
|  | | | | | | | | |
|
|
|
|
|
|
|
|
| | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | H | A | I | M | G | P | N | G | S | G | K | S | T | L | S | A | T | L | A | G | R | E | D | Y | E | V | T | G | G | T | V | E |
| Query Conservation | |
| | |
| |
| | |
|
|
|
|
|
|
|
| | |
| |
| | | | | | | | |
| |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
|
| | | |
|
|
|
|
|
|
| | |
| | | | | | | | | | | | | | |
| Template Sequence | |
K | L | V | F | L | G | E | Q | S | V | G | K | T | S | L | I | T | R | F | M | Y | D | S | F | D | N | T | Y | Q | A | T | I | G |
| Template Known Secondary structure | |
| | | | | | S | T | T | S | S | | | | | | | | | | T | S |
|
|
|
| S |
|
|
|
|
| S |
| Template Predicted Secondary structure | |
| | | | |
|
|
|
|
|
| | | | | | | | | | |
|
|
|
|
|
|
|
|
| | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
