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Job DescriptionP77499
Confidence100.00%DateThu Jan 5 12:30:01 GMT 2012
Rank39Aligned Residues220
% Identity21%Templatec2nq2C_
PDB info PDB header:metal transportChain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30.........40.........50.........60.........70.........
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Query Sequence  MLSIKDLHVSV. EDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEG
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Template Sequence  ALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLG. . IHRPIQGKIEVYQS. . . . . . . . . . . . . .
Template Known Secondary structure  TTTTTT


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   4.....10.........20.........30.........40.........50... ......60.......
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQM
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Template Sequence  IGFVPQFFSSPFAYSVLDIVLMGRSTHIN. . . TFAKPKSHDYQVAMQALDYLNLTH. . LAKREFTSLSGGQRQLILIARA
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   68.70.........80.........90...... ...100.........110.........120 .........130.........140..
 
   160.........170.........180.........190. ........200.........210.........220.........230........
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Query Sequence  AVLEPELCILDESDSGLDIDALKVVADGVNSL. RDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEE
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Template Sequence  IASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAI. ANKTLLLNKQNFK. FGETRNILTSEN
Template Known Secondary structure  TT
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   143......150.........160.........170.........180.........190..... ....200........ .210.........220
 
   239240...
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Query Sequence  QGYGW
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Template Sequence  LTALF
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   221....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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