Job Description P77499 Confidence 100.00% Date Thu Jan 5 12:30:01 GMT 2012 Rank 40 Aligned Residues 222 % Identity 19% Template c2cbzA_ PDB info PDB header:transport Chain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1 Resolution 1.5 Å

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		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	S	I	K	D	L	H	V	S	V	.	.	E	D	K	A	I	L	R	G	L	S	L	D	V	H	P	G	E	V	H	A	I	M	G	P	N	G	S	G	K	S	T	L	S	A	T	L	A	G	R	E	D	Y	E	V	T	G	G	T	V	E	F	K	G	K	D	L	L	A	L	S	P	E	D	R	A	G	E	G
Query Conservation												.	.
Alig confidence												.	.																																							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	V	R	N	A	T	F	T	W	A	R	S	D	P	P	T	L	N	G	I	T	F	S	I	P	E	G	A	L	V	A	V	V	G	Q	V	G	C	G	K	S	S	L	L	S	A	L	L	A	.	.	E	M	D	K	V	E	G	H	V	A	I	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure											S		T	T	S			S										T	T								S	T	T	S	S									T	T	.	.		S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.	.															.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	M	A	F	Q	Y	P	V	E	I	P	G	V	S	N	Q	F	F	L	Q	T	A	L	N	A	V	R	S	Y	R	G	Q	E	T	L	D	R	F	D	F	Q	D	L	M	E	E	K	I	A	L	L	K	M	P	E	D	L	L	T	R	S	V	N	V	G	F	S	G	G	E	K	K	R	N	D	I	L	Q	M
Query Conservation
Alig confidence									.																		.	.	.	.	.
Template Conservation									.																		.	.	.	.	.
Template Sequence		V	A	Y	V	P	Q	Q	.	A	W	I	Q	N	D	S	L	R	E	N	I	L	F	G	C	Q	.	.	.	.	.	L	E	E	P	Y	Y	R	S	V	I	Q	A	C	A	L	L	P	D	L	E	I	L	P	S	G	D	R	T	E	I	G	E	K	G	V	N	L	S	G	G	Q	K	Q	R	V	S	L	A	R	A
Template Known Secondary structure							S	S	.					S									T	T	S		.	.	.	.	.			T	T									T	T						T	T	S	T	T	G	G	G	S			S	T	T	S	B
Template Predicted Secondary structure									.																		.	.	.	.	.
Template SS confidence
		708	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.						.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		A	V	L	E	P	E	L	C	I	L	D	E	S	D	S	G	L	D	I	D	A	L	K	V	V	A	D	G	V	N	S	L	R	D	.	.	G	K	R	S	F	I	I	V	T	H	Y	Q	R	I	L	D	Y	I	K	P	D	Y	V	H	V	L	Y	Q	G	R	I	V	K	S	G	D	F	T	L	V	K	Q	L	E
Query Conservation																																				.	.
Alig confidence																																				.	.																		.	.																									.
Template Conservation																																																							.	.																									.
Template Sequence		V	Y	S	N	A	D	I	Y	L	F	D	D	P	L	S	A	V	D	A	H	V	G	K	H	I	F	E	N	V	I	G	P	K	G	M	L	K	N	K	T	R	I	L	V	T	H	S	M	S	Y	L	P	Q	.	.	V	D	V	I	I	V	M	S	G	G	K	I	S	E	M	G	S	Y	Q	E	L	L	A	R	.
Template Known Secondary structure							S						S	T	T	T	T	S												T	T	S	T	T	S	T	T	T	T	S							S		S	T	T	G	G	G	.	.	S	S							T	T															.
Template Predicted Secondary structure																																																							.	.																									.
Template SS confidence
		782	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	Y	G	W	L	T	E	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	A	F	A	E	F	L	R	T	Y
Template Known Secondary structure		T	S									T
Template Predicted Secondary structure
Template SS confidence
		859	860	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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