Job Description P77499 Confidence 99.39% Date Thu Jan 5 12:30:01 GMT 2012 Rank 72 Aligned Residues 82 % Identity 26% Template c1ii8B_ PDB info PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		T	R	S	V	N	V	G	F	S	G	G	E	K	K	R	N	D	I	L	.	.	.	.	.	.	Q	M	A	V	L	E	P	E	L	C	I	L	D	E	S	D	S	G	L	D	I	D	A	L	K	V	V	A	D	G	V	N	S	L	R	D	G	K	R	S	F	I	I	V	T	H	Y	Q	R	I	L	D	Y	I	K
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																																																						.	.
Template Conservation																																																																																.	.
Template Sequence		K	E	R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	E	I	S	L	L	I	L	D	E	P	T	P	Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	L	K	K	I	P	Q	V	I	L	V	S	H	D	E	E	L	K	D	A	.	.
Template Known Secondary structure		B				G	G	G	S																						S	S		S								S	S	S	S		S													T	G	G	G	S	S							S		G	G	G	G	G	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
		213	.	.	.			.	.	.	220	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		P	D	Y	V	.	.	H	V	L	Y	Q	G
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		A	D	H	V	I	R	I	S	L	E	N	G
Template Known Secondary structure		S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		863	.	.	.	.	.	.	870	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions