Job Description P42588 Confidence 99.80% Date Thu Jan 5 12:01:35 GMT 2012 Rank 207 Aligned Residues 315 % Identity 13% Template d2e7ja1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SepSecS-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.	.
Template Sequence		G	K	L	T	E	E	A	R	Q	A	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	W	P	P	I	H	D	F	I	H	N	Q	L	P	K	F	L	.	.	G	C	D	V	A	R	V	T	N	G	A	R	E	A	K	F	A	V	M	H	S	L	A	.	.	.	.	.	.	K	K	D	A	W	V	V	M
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.										T						T	.	.	T	S	S						S	S														.	.	.	.	.	.		T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																	.	.																								.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.													.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A
Query Conservation
Alig confidence																						.	.	.	.	.																												.																					.	.	.	.
Template Conservation																						.	.	.	.	.																												.																					.	.	.	.
Template Sequence		D	E	N	C	H	Y	S	S	Y	V	A	A	E	R	A	G	L	N	I	A	.	.	.	.	.	L	V	P	K	T	D	Y	P	D	Y	A	I	T	P	E	N	F	A	Q	T	I	E	E	T	K	K	R	.	G	E	V	V	L	A	L	I	T	Y	P	D	G	N	Y	G	N	L	P	D	.	.	.	.	V	K	K
Template Known Secondary structure			T	T												T	T					.	.	.	.	.							T	T	T																T	T	T	.	S									S	S		T	T	T						.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.																												.																					.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	.	.
Query Conservation																																																																																.	.
Alig confidence																							.	.	.																											.																												.	.
Template Conservation																							.	.	.																											.
Template Sequence		I	A	K	V	C	S	E	Y	D	V	P	L	L	V	N	G	A	Y	A	I	G	.	.	.	R	M	P	V	S	L	K	E	I	G	A	D	F	I	V	G	S	G	H	K	S	M	A	A	S	G	.	P	I	G	V	M	G	M	K	E	E	W	A	E	I	V	L	R	R	S	E	K	Y	K	N	K	E	V	E	L
Template Known Secondary structure								T	T	T								T	T	T	B	T	.	.	.	T	B								T		S										S	S			S	.	S								T	T	T	T	T	T	T	T		B		S	S		T	T	S	B	G	G	G
Template Predicted Secondary structure																							.	.	.																											.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
						335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure		.	.	.	.																				.																																																		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																				.																																																		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	.	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																				.																																																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.																				.																					.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		L	G	C	T	A	R	G	A	T	I	I	T	L	M	A	S	F	P	H	V	R	E	R	I	K	R	W	D	E	E	V	E	K	A	R	R	F	A	A	E	M	E	K	L	.	.	.	.	G	I	K	Q	L	G	D	N	P	H	N	H	D	L	M	F	F	H	A	E	V	L	Y	E	I	S	K	K	A	K	G	G
Template Known Secondary structure		T	T					S																	G	G	G																		T	.	.	.	.	T					S	S	S	S			S	S																S	S	S	G
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
				403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A
Query Conservation		.	.
Alig confidence		.	.																		.								.
Template Conservation																					.								.
Template Sequence		R	F	F	L	Y	R	E	L	K	S	R	K	I	H	G	I	K	P	G	.	L	T	R	Y	F	K	L	.	S	T	Y	G	L	S	D	E	E	V	D	Y	V	L	N	A	F	K	E	I	I	E	K
Template Known Secondary structure		G	G									T	T				S		T	T	.			S					.			T	T
Template Predicted Secondary structure																					.								.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions