Job Description P42588 Confidence 99.74% Date Thu Jan 5 12:01:35 GMT 2012 Rank 216 Aligned Residues 320 % Identity 17% Template d2ctza1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T
Query Conservation
Alig confidence																															.																.	.																									.	.	.	.	.
Template Conservation																															.																.	.																									.	.	.	.	.
Template Sequence		T	T	S	Y	V	F	K	S	P	E	H	A	A	N	L	F	A	L	K	E	F	G	N	I	Y	S	R	I	M	.	N	P	T	V	D	V	L	E	K	R	L	A	A	L	E	.	.	G	G	K	A	A	L	A	T	A	S	G	H	A	A	Q	F	L	A	L	T	T	L	A	Q	.	.	.	.	.	A	G	D	N
Template Known Secondary structure			S					S										T	T	T	T	G	G	G	S		B	T	T	B	.																.	.	T		S						S	S															.	.	.	.	.	T	T
Template Predicted Secondary structure																															.																.	.																									.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	.	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P
Query Conservation																																												.
Alig confidence																											.	.	.	.	.	.	.	.	.									.										.	.	.	.	.	.																					.	.
Template Conservation																											.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.																					.	.
Template Sequence		I	V	S	T	P	N	L	Y	G	G	T	F	N	Q	F	K	V	T	L	K	R	L	G	I	E	.	.	.	.	.	.	.	.	.	V	R	F	T	S	R	E	E	R	P	E	E	F	L	A	L	T	D	.	.	.	.	.	.	E	K	T	R	A	W	W	V	E	S	I	G	N	P	A	L	N	I	P	D	.	.
Template Known Secondary structure						S												T					T	T			.	.	.	.	.	.	.	.	.						T	T												.	.	.	.	.	.	T	T								S	S		T	T	T						.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.																					.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.										.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	.	.	.	.	.	.	.	.	.	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation		.	.																									.	.	.	.	.
Template Sequence		.	.	L	E	A	L	A	Q	A	A	R	E	K	G	V	A	L	I	V	D	N	T	F	G	M	G	.	.	.	.	.	G	Y	L	L	R	P	L	A	W	G	A	A	L	V	T	H	S	L	T	K	W	V	G	G	H	G	A	V	I	A	G	A	I	V	D	G	G	N	F	P	W	E	G	G	R	Y	P	L	L
Template Known Secondary structure		.	.												T								G	G	G	G	G	.	.	.	.	.	G	T	S			G	G	G	G	T		S						T	T	T	T	T	T		S	S											S		S			T	T	T	T
Template Predicted Secondary structure		.	.																									.	.	.	.	.
Template SS confidence
				163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.																			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																												.
Template Sequence		T	E	P	Q	P	G	Y	H	G	L	R	L	T	E	A	F	G	E	L	A	F	I	V	K	A	R	V	D	G	L	R	D	Q	G	Q	A	L	G	P	F	E	A	W	V	V	L	L	G	M	E	T	L	S	L	R	A	E	R	H	V	E	N	T	L	H	L	A	H	W	L	L	E	Q	P	.	Q	V	A	W	V
Template Known Secondary structure			S		B	G	G	G	T	T	B							G	G	G									T																						T	T																					T		T	.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.
																					385	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	K	G	M	L	M	A	I	E	F	V	.	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	P	G	L	P	H	H	P	H	H	D	R	A	Q	K	Y	F	K	G	K	P	G	A	V	L	T	F	G	L	K	G	G	Y	E	A	A	K	R	F	I	S	R	L	K	L	I	S	H	L	A	N	V	G	D	T	R	T	L	A	I	H	P	A	S	T	T	H	S	Q	L	S	P	E	E	Q	A	Q	A	G
Template Known Secondary structure				T	T	S	T	T		T	T									T	T				S							T	T											T		S	S	S				S					S	S						G	G	G	T	T	T	T	T	S									T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
				422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L
Query Conservation		.	.
Alig confidence		.	.											.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		V	S	P	E	M	V	R	L	S	V	G	L	.	.	.	.	E	H	V	E	D	L	K	A	E	L	K	E	A	L
Template Known Secondary structure				T	T								S	.	.	.	.	S													T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.					.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions