Job Description P42588 Confidence 100.00% Date Thu Jan 5 12:01:35 GMT 2012 Rank 35 Aligned Residues 347 % Identity 31% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	W	Q	A	G	S	L	N	T	L	V	D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S
Query Conservation
Alig confidence																																																										.	.																	.
Template Conservation																																																										.	.																	.
Template Sequence		P	I	V	F	D	H	V	K	G	A	H	I	W	D	V	D	G	N	Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	H	A	H	P	E	V	I	D	A	L	H	A	A	L	E	K	G	T	S	F	G	A	P	.	.	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	.	S	V	E	M	V
Template Known Secondary structure										B	T					T	T							S	S	T	T	T	T	T		T	T		B	T													T	T		S			S	S		.	.																S	.	S		S
Template Predicted Secondary structure																																																										.	.																	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E
Query Conservation
Alig confidence																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	.	.	.	Q	R	E	K	V	I	K	F	E	G	C	Y	H	G	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	L	T	A	P	Y	N	D	L	E	A	V	S	R	L	F	E	.
Template Known Secondary structure					S	S																	.	.	.	T									T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T											.
Template Predicted Secondary structure																							.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G
Query Conservation
Alig confidence		.	.																																																				.
Template Conservation		.	.																																																				.
Template Sequence		.	.	Q	Y	P	N	D	I	A	G	V	I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	.	R	I	A	Y	G	G	A	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	V	I	G	G
Template Known Secondary structure		.	.		S	T	T	T								S	S	B		S	S	S		B				T	T												T	T								T	T	T	T	T	.	T	T		T	T							T				S						G	G	G	G	T
Template Predicted Secondary structure		.	.																																																				.
Template SS confidence
				179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A
Query Conservation
Alig confidence				.																		.	.	.	.																																																			.
Template Conservation				.																		.	.	.	.																																																			.
Template Sequence		G	L	.	P	V	G	A	Y	G	G	R	A	E	I	M	K	M	V	A	P	.	.	.	.	A	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	.	H	E	V	C	G
Template Known Secondary structure		T	S	.													T	T	S		T	.	.	.	.	T																						T	S	T	T																						T	T	T	.
Template Predicted Secondary structure				.																		.	.	.	.																																																			.
Template SS confidence
		256	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.														.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	K	G	M	L	M	A	I	E	F	V	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		G	H	I	S	G	M	F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	.	.	.	.	F	E	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T	V	L	S	Q
Template Known Secondary structure					T	T						S	S	S				S	S					T	T	S															T	T					S	S	T	.	.	.	.	T	S						T	T																		T	T
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		452
Predicted Secondary structure
Query SS confidence
Query Sequence		M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		411

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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