Job Description P42588 Confidence 99.84% Date Thu Jan 5 12:01:35 GMT 2012 Rank 178 Aligned Residues 336 % Identity 14% Template d2bkwa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.57

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	.	.	.	.	.	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R
Query Conservation																														.	.	.	.	.
Alig confidence																														.	.	.	.	.																																													.
Template Conservation																																																																															.
Template Sequence		T	L	L	I	P	G	P	I	I	L	S	G	A	V	Q	K	A	L	D	V	P	S	L	G	H	T	S	P	E	F	V	S	I	F	Q	R	V	L	K	N	T	R	A	V	F	K	S	A	A	A	S	K	S	Q	P	F	V	L	A	G	S	G	T	L	G	W	D	I	F	A	S	N	F	I	L	S	K	.	A	P
Template Known Secondary structure					S	S	S	S										T	T	S						T	T	S																		T	T			G	G	G	T								S		T	T											S		T	T	.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.																.	.	.	.	.
Template Sequence		N	K	N	V	L	V	V	S	T	G	T	F	S	D	R	F	A	D	C	L	R	S	Y	G	A	Q	V	D	V	V	R	P	L	K	I	.	.	.	.	.	.	G	E	S	V	P	L	E	L	I	T	E	K	L	S	Q	.	.	.	.	.	N	S	Y	G	A	V	T	V	T	H	V	D	T	S	T	A	V	L	S
Template Known Secondary structure										S	S													T	T									S	S	T	.	.	.	.	.	.	T	S														.	.	.	.	.	S			S						S			T	T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																			.	.																																																											.	.	.
Query SS confidence																			.	.																																																											.	.	.
Query Sequence		P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	.	.	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	.	.	.
Query Conservation																			.	.																																																											.	.	.
Alig confidence			.	.	.	.													.	.													.	.	.	.	.																																										.	.	.
Template Conservation			.	.	.	.																											.	.	.	.	.
Template Sequence		D	.	.	.	.	L	K	A	I	S	Q	A	I	K	Q	T	S	P	E	T	F	F	V	V	D	A	V	C	S	I	G	.	.	.	.	.	C	E	E	F	E	F	D	E	W	G	V	D	F	A	L	T	A	S	Q	A	I	G	A	P	A	G	L	S	I	S	L	C	S	S	R	F	X	D	Y	A	L	N	D	S
Template Known Secondary structure			.	.	.	.													T	T	S							T	T	T	T	T	.	.	.	.	.	T	S				T	T	T	T	T		S													S																T
Template Predicted Secondary structure			.	.	.	.																											.	.	.	.	.
Template SS confidence
		155					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
																										324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	.	L	A	R	E	Y	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation
Template Sequence		K	N	G	H	V	H	G	Y	F	S	S	L	R	R	W	T	P	I	X	E	N	Y	E	A	G	K	G	A	Y	F	A	T	P	P	V	Q	L	I	N	S	L	D	V	A	L	K	E	I	L	E	E	G	L	H	K	R	W	D	L	H	R	E	X	S	D	W	F	K	D	S	L	V	N	G	L	Q	L	T	S	V
Template Known Secondary structure							S		S	T	T														T	T					S	S																																										T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.				.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																													.	.	.										.
Query SS confidence																																													.	.	.										.
Query Sequence		D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	.	.	.	A	K	T	I	R	I	E	P	P	.	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R
Query Conservation																																													.	.	.										.
Alig confidence																							.	.	.																				.	.	.										.
Template Conservation																							.	.	.
Template Sequence		S	R	Y	P	S	N	X	S	A	H	G	L	T	A	V	Y	V	A	D	P	P	.	.	.	D	V	I	A	F	L	K	S	H	G	V	V	I	A	G	G	I	H	K	D	I	G	P	K	Y	I	R	I	G	H	X	G	V	T	A	C	N	K	N	L	P	Y	X	K	N	C	F	D	L	I	K	L	A	L	Q
Template Known Secondary structure		S		S	S	S	T	T	B		S	S							S				.	.	.									T	T				B					T	T	T	G	G	G								G	G	G	T	S	S	T	T		T													T	T
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions