Job Description P42588 Confidence 99.80% Date Thu Jan 5 12:01:35 GMT 2012 Rank 204 Aligned Residues 344 % Identity 13% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																						.	.	.	.	.	.	.	.
Query SS confidence																									.	.																																						.	.	.	.	.	.	.	.
Query Sequence		D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	.	.	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	.	.	.	.	.	.	.	.	P	G	K	L	K	Y	S	F	F	C
Query Conservation																									.	.																																						.	.	.	.	.	.	.	.
Alig confidence								.																	.	.																																						.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		D	Q	R	A	T	K	.	V	D	L	G	I	G	A	Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	S	Y	N	H	E	Y	L	G	I	T	G	L	P	S	L	T	S	N	A	A	K	I	I	F	G	T	Q	S	D	A	L	Q	E	D	R	V	I	S	V	Q	S
Template Known Secondary structure					S	S		.				S	S				B		T	T	S		B															T		T	T								T	T																T	T						T	T
Template Predicted Secondary structure								.
Template SS confidence
		27	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	.	.	.	.	A	M	R	T	A	L	N
Query Conservation																																																																							.	.	.	.
Alig confidence																				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	G	T	G	A	L	H	I	S	A	K	F	F	S	K	F	F	.	.	.	P	D	K	L	V	Y	L	S	K	P	T	W	A	N	H	M	A	I	F	E	N	Q	G	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	T	Y	P	Y	W	A	N	E	T	K	S	L	D	L	N	G	F	L	N
Template Known Secondary structure																				.	.	.	T	T								S			T	T							T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T
Template Predicted Secondary structure																				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.														.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.								.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	.	.	.	.	.	.	.	F	A	C	E	H	E	N	V	Q	P	D	I	L
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																								.																																						.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		A	I	Q	K	A	P	E	G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	.	L	D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T	V	S	P	V	F
Template Known Secondary structure						S		T	T								S	S		T	T	T		.																		T	T								S		T	T	T	S	S	S						T										T	T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
					297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.										.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.									.	350	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		.	.	.	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	.	.	.	.	.	.	.	.	.	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	.	.	.	.	.	.	.	.	V	L	L	E	Q	N	L	P
Query Conservation		.	.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence		.	.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	C	Q	S	F	A	K	N	A	G	M	Y	G	E	R	V	G	C	F	H	L	A	L	T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	K	D	M	V	T	M	S
Template Known Secondary structure							T	T	T	S			G	G	G											S		T	T																		T	T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E
Query Conservation
Alig confidence																							.																		.	.	.	.																					.	.	.	.	.	.						.
Template Conservation																							.																		.	.	.	.																					.	.	.	.	.	.						.
Template Sequence		S	R	I	T	K	M	R	H	A	L	R	D	H	L	V	K	L	G	T	P	G	.	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	.	.	.	.	T	P	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	A	S	G	.	.	.	.	.	.	R	A	S	I	A	.	G	L	N	Q	G
Template Known Secondary structure																			T		S	S	.			T							S	S							.	.	.	.																		T	T	S	.	.	.	.	.	.				G	G	.	G			T	T
Template Predicted Secondary structure																							.																		.	.	.	.																					.	.	.	.	.	.						.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.							.	.	.	.	390		.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	E	Y	V	A	K	A	I	D	E	V	V	R	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions