Return to main results Retrieve Phyre Job Id

Job DescriptionP42588
Confidence77.61%DateThu Jan 5 12:01:35 GMT 2012
Rank237Aligned Residues121
% Identity14%Templated1xp8a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170.........180.........190.........200.........210......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIE
Query Conservation         
 
  




 
 




       

  

     


 
  

             
           
  
Alig confidence 






















































............












Template Conservation 
  
 

 
 
 

 


 


            



  
           
  ............   
         
Template Sequence  IPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVN. . . . . . . . . . . . TDELLVSQPDNGE
Template Known Secondary structure  TTSSTTSSTT

SS



TT

............GGG


SS
Template Predicted Secondary structure 






















............






Template SS confidence 















































































   68.70.........80.........90.........100.........110.........120.. .......130.....
 
   217..220.........230.........240.........250. ........260.........270
Predicted Secondary structure 















.......

Query SS confidence 


































. . . . . . .


















Query Sequence  AMRTALNECKKTGDDVAAVILEPIQGEGGVILPPP. . . . . . . GYLTAVRKLCDEFGALMIL
Query Conservation   
   
          







    
      .......  
  
  

   




 
Alig confidence 











.





















.......


















Template Conservation       
   
  .    






  
                 
  
  

      

 
Template Sequence  QALEIMELLVRS. GAIDVVVVDSVAALTPRAEIPGLQARLMSQALRKLTAILSKTGTAAIF
Template Known Secondary structure  TT.T

S
TTT


STT


TTT

Template Predicted Secondary structure  .















Template SS confidence 




























































   136...140....... ..150.........160.........170.........180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions