Job Description P42588 Confidence 99.96% Date Thu Jan 5 12:01:35 GMT 2012 Rank 58 Aligned Residues 338 % Identity 14% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																								.
Query SS confidence																																										.	.	.	.	.	.																								.
Query Sequence		Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	.	.	.	.	.	.	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	.	F	F	C	N	S	G	T	E	S	V
Query Conservation																																										.	.	.	.	.	.																								.
Alig confidence																																										.	.	.	.	.	.																	.	.						.
Template Conservation																																																																.	.
Template Sequence		Q	N	L	P	A	H	K	A	F	L	G	G	G	V	R	S	H	H	V	P	P	V	V	Q	A	L	A	A	R	G	E	F	L	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	E	Y	Q	T	M	I	A	E	L	A	.	.	G	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L
Template Known Secondary structure		T	S				T	T					S	S															T	S								S			S	G	G	G																				.	.	T	S	S				S		B	S	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A
Query Conservation
Alig confidence													.	.	.																														.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation													.	.	.																														.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		A	E	G	V	L	L	A	L	R	E	T	.	.	.	G	R	M	G	V	L	V	S	Q	G	V	H	P	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A	K	.	.	.	.	.	.	.	.	.	L	L	T	L	P	L	E	G	G	R	T	P	L	P	E	V	G	.	.	.	.	.	.	E	E	V	G	A
Template Known Secondary structure													.	.	.	T								T	T	S															T	T			.	.	.	.	.	.	.	.	.							B	T	T	B								.	.	.	.	.	.	T	T
Template Predicted Secondary structure													.	.	.																														.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A
Query Conservation
Alig confidence								.									.	.	.	.
Template Conservation								.									.	.	.	.
Template Sequence		V	V	V	Q	N	P	.	N	F	L	G	A	L	E	D	.	.	.	.	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	L	G	V	L	K	P	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T
Template Known Secondary structure						S	S	.		T	T	S	B				.	.	.	.											T	T									T	T	G	G	G	T	S							T		S							T	T	T	T				G	G	G		S
Template Predicted Secondary structure								.									.	.	.	.
Template SS confidence
		200	.	.	.	.	.		.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.																															.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E	T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A	K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H
Template Known Secondary structure			G	G	G	G	G	G			S									T	T	S									G	G	G	S					G	G	G	S	S					S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	.	.	.	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V
Query Conservation																																																										.	.	.
Alig confidence											.	.	.	.	.																																											.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		K	L	H	A	L	L	L	E	V	.	.	.	.	.	P	G	V	R	P	F	T	P	K	P	F	F	N	E	F	A	L	A	L	P	K	D	P	E	A	V	R	R	A	L	A	E	R	G	F	H	G	A	T	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E	L	H	E	E	E	D	L	L	A	L
Template Known Secondary structure								T	T	S	.	.	.	.	.	T	T					S		S	S	B		S							S	S												T	T									T	T	S		S	S								T	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		442	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	A	R	K	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	A	L	K	E	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions