Return to main results Retrieve Phyre Job Id

Job DescriptionP42588
Confidence24.26%DateThu Jan 5 12:01:35 GMT 2012
Rank362Aligned Residues81
% Identity12%Templated1wkya2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190...... ...200.........210.........220.........230.........240.........250.........260......
Predicted Secondary structure 





.
































Query SS confidence 








.





































































Query Sequence  LSATAKSTF. RKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGA
Query Conservation 
        .     
           
   
   
          







    
        
  
  

   

Alig confidence 








.






































...



























Template Conservation 
 
 
  
 
 

    




            
   
   
 
 


...               

  
  
   

Template Sequence  FYVSGTTLYDANGNPFVMRGINHGHAWYKDQATTAIEGIANTGANTVRI. . . VLSDGGQWTKDDIQTVRNLISLAEDNNL
Template Known Secondary structure 
TT
TTS
B



GGG
GGGTTT
S...

SSSS



TT
Template Predicted Secondary structure 
















...










Template SS confidence 















































































   36...40.........50.........60.........70.........80.... .....90.........100.........110..
 
   267..270.
Predicted Secondary structure 
Query SS confidence 




Query Sequence  LMILD
Query Conservation 


 
Alig confidence 




Template Conservation   



Template Sequence  VAVLE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   113....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions