Job Description P42588 Confidence 99.63% Date Thu Jan 5 12:01:35 GMT 2012 Rank 222 Aligned Residues 305 % Identity 12% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	.	.	.	.	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.															.	.	.	.	.	.																										.	.
Template Conservation																																													.	.	.	.	.	.																										.	.
Template Sequence		D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	.	.	.	.	.	.	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	.	.	K	K	I	S
Template Known Secondary structure																T	T			T	T	T								S	S													T	.	.	.	.	.	.		T	T								G	G	G	T			G	G	G			B		S	S	.	.		B		S
Template Predicted Secondary structure																																													.	.	.	.	.	.																										.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		F	M	P	L	L	P	G	F	R	H	V	P	F	G	.	.	.	.	.	.	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.												.	.	.	.	.											.	.									.	.	.	.
Template Conservation																																	.	.	.	.	.											.	.									.	.	.	.
Template Sequence		A	T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	D	Y	D	R	L	E	E	N	A	R	L	.	.	.	.	.	F	H	P	K	L	I	I	A	G	T	.	.	S	C	Y	S	R	N	L	D	.	.	.	.	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A
Template Known Secondary structure							S							B		T	T	T		S	B												.	.	.	.	.				S							.	.	S	S			S				.	.	.	.											T	T								T
Template Predicted Secondary structure																																	.	.	.	.	.											.	.									.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.								.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	.	.	.	.	.	.	.	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																		.	.																											.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		H	I	S	G	L	V	V	A	G	V	V	P	S	P	F	E	.	.	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A
Template Known Secondary structure		T	T							T	S	S			G	G	G	.	.	T		S						S	S	G	G	G				S									S	B					B												T	T	T	T			S
Template Predicted Secondary structure																		.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																																															.																					.	.	.
Query SS confidence									.	.	.																																															.																					.	.	.
Query Sequence		I	N	V	L	L	E	Q	.	.	.	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	.	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	.	.	.
Query Conservation									.	.	.																																															.																					.	.	.
Alig confidence									.	.	.																					.	.	.	.																							.																					.	.	.
Template Conservation																																.	.	.	.
Template Sequence		L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E	L	.	.	.	.	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G
Template Known Secondary structure						T	S																								T	.	.	.	.	T				G	G	G	S		S	S	S						G	G	G	G	T													T	T									S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
						420	.	.	.	.	.	.	.					.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure		.	.	.	.									.	.	.	.
Query SS confidence		.	.	.	.									.	.	.	.
Query Sequence		.	.	.	.	N	N	A	K	T	I	R	I	.	.	.	.	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R
Query Conservation		.	.	.	.									.	.	.	.
Alig confidence		.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E	L	T	V
Template Known Secondary structure			S		T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions