Job Description P42588 Confidence 99.77% Date Thu Jan 5 12:01:35 GMT 2012 Rank 213 Aligned Residues 302 % Identity 13% Template d1n8pa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S
Query Conservation
Alig confidence																									.	.																								.	.	.	.	.	.
Template Conservation																									.	.																								.	.	.	.	.	.
Template Sequence		T	Y	E	Y	S	R	S	Q	N	P	N	R	E	N	L	E	R	A	V	A	A	L	E	.	.	N	A	Q	Y	G	L	A	F	S	S	G	S	A	T	T	A	T	I	L	Q	S	L	P	.	.	.	.	.	.	Q	G	S	H	A	V	S	I	G	D	V	Y	G	G	T	H	R	Y	F	T	K	V	A	N	A	H
Template Known Secondary structure		S			B	T	T	T																T	.	.	T		S						S												T	S		.	.	.	.	.	.	S	S							S	S												T	S	T	T	T
Template Predicted Secondary structure																									.	.																								.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	.	.	.	.	A	L	M	I	L
Query Conservation																																																																									.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																					.	.	.	.													.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																					.	.	.	.
Template Sequence		G	V	E	.	.	.	.	.	.	.	.	.	.	T	S	F	T	N	D	L	L	N	D	L	P	Q	L	I	K	.	.	.	.	.	.	E	N	T	K	L	V	W	I	E	T	P	T	N	P	T	L	K	V	T	D	.	.	.	.	I	Q	K	V	A	D	L	I	K	K	H	A	A	G	Q	D	V	I	L	V	V
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.	.					S	S									S		.	.	.	.	.	.	S	S								S	S		T	T	T						.	.	.	.												T	T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		118	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	.	.	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N
Query Conservation																																														.	.
Alig confidence							.	.	.	.																																				.	.
Template Conservation							.	.	.	.
Template Sequence		D	N	T	F	L	.	.	.	.	S	P	Y	I	S	N	P	L	N	F	G	A	D	I	V	V	H	S	A	T	K	Y	I	N	G	H	S	D	V	V	L	G	V	L	A	T	N	N	K	P	L	Y	E	R	L	Q	F	L	Q	N	A	I	G	A	I	P	S	P	F	D	A	W	L	T	H	R	G	L	K	T	L
Template Known Secondary structure				T	T	T	.	.	.	.							G	G	G	G	T		S						T	T	T	T	T	T		S	S										S																																T	T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		178	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.													.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	M	A	I	E	F	V	.	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		H	L	R	V	R	Q	A	A	L	S	A	N	K	I	A	E	F	L	A	A	D	K	E	N	V	V	A	V	N	Y	P	G	L	K	T	H	P	N	Y	D	V	V	L	K	Q	H	R	D	A	L	G	G	G	M	I	S	F	R	I	K	G	G	A	E	A	A	S	K	F	A	S	S	T	R	L	F	T	L	A	E
Template Known Secondary structure																				T	S		T	T	T							T	T	S	T	T	S	T	T								S	G	G	G				S							S	S													S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		416	.	.	.	420	.																										.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	T	L	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	G	G	I	E	S	L	L	E	V	P	A	V	M	T	H	G	G	I	P	K	E	A	R	E	A	S	G	V	F	D	D	L	V	R	I	S	V	G	I	E	D	T	D	D	L	L	E	D	I	K	Q	A	L	K	Q	A
Template Known Secondary structure						S	S						T	T	T	T	T	S		S	S		T	T	T	T	T	T	T	S			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions