Return to main results Retrieve Phyre Job Id

Job DescriptionP42588
Confidence99.94%DateThu Jan 5 12:01:35 GMT 2012
Rank70Aligned Residues331
% Identity16%Templated1lc5a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.46

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAAL
Query Conservation   

  


   
      

  
 
  
   
                  


 
          
 
  




 
 

Alig confidence 











..




.























....































Template Conservation        


   .. 
   .    
  
          

    ....  

  

         
  
 
    
    
Template Sequence  ISPDQLLDFSAN. . INPLG. MPVSVKRALIDNLDCIERYPDADY. . . . FHLHQALARHHQVPASWILAGNGETESIFTVA
Template Known Secondary structure  S
GGGS
SS
..

TT
.

TGGGGGS


TT
....TS
GGGSS
Template Predicted Secondary structure 





..




.









....





Template SS confidence 















































































   21........30.. ..... ..40.........50.........60. ........70.........80.........90...
 
   159160.........170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  KLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILE
Query Conservation 


       

  

     


 
  

             
           
   
   
          





Alig confidence 


.......
























.............































Template Conservation     ....... 
  

   
            
  .............                                
Template Sequence  SGL. . . . . . . KPRRAMIVTPGFAEYGRALAQSGCE. . . . . . . . . . . . . IRRWSLREADGWQLTDAILEALTPDLDCLFLC
Template Known Secondary structure  .......

SS

TTT
.............

GGGTT


TT

TT

Template Predicted Secondary structure 
.......









.............


















Template SS confidence 















































































   94.. ...100.........110.........120. ........130.........140.........150...
 
   239240.........250.........260.........270.........280.........290...... ...300.........310......
Predicted Secondary structure 

































..










Query SS confidence 

























































. .



















Query Sequence  PIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDIL. . CLAKALGGGVMPIGATIATE
Query Conservation 

    
        
  
  

   




 


 

 

 
   
    

 


 ..
  
 
  
  




    
Alig confidence 






.

















































..



















Template Conservation         .          
   
      

 



                    
            
          
Template Sequence  TPNNPTG. LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD
Template Known Secondary structure  SS
TTT
.



T

TTGGGSTT


SGGG
TT
TTSTTTTT
TTT




Template Predicted Secondary structure 






.













































Template SS confidence 















































































   154.....160 .........170.........180.........190.........200.........210.........220.........230..
 
   317..320.........330.........340.........350.........360.........370.........380.........390......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFV
Query Conservation   
             
      
 


 
 
       
          
   
  
       
  


 
    
 
 
Alig confidence 









..












































.....

















Template Conservation            ..                                         
   .....      
     
     
Template Sequence  DAAMARMRRQ. . QMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQL. . . . . PLLTVYPGRANYLLLRCE
Template Known Secondary structure  ..S
TT
S
GGG
TS.....TT


SSSS
Template Predicted Secondary structure  ..











.....








Template SS confidence 















































































   233......240.. .......250.........260.........270.........280....... ..290.........300.....
 
   397..400.........410.........420. ........430.........440.........
Predicted Secondary structure 





....







Query SS confidence 
























. . . .



























Query Sequence  DNEIGYNFASEMFRQRVLVAGTLNN. . . . AKTIRIEPPLTLTIEQCELVIKAARKAL
Query Conservation             
   

 
      ....   


 
 
  
 



  
  
  

Alig confidence 

..




















....








...















Template Conservation    ..   
   
   

 
  
          



  ...
 


  

 


 

Template Sequence  RE. . DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR. . . SAAQNERLLAALRNVL
Template Known Secondary structure 
T..T

TTT

TTSTT

TT

...

Template Predicted Secondary structure 

..













...

Template SS confidence 
























































   306. ..310.........320.........330.........340. ........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions