Job Description P42588 Confidence 99.90% Date Thu Jan 5 12:01:35 GMT 2012 Rank 110 Aligned Residues 332 % Identity 13% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

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		100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure														.										.	.	.	.	.	.	.	.
Query SS confidence														.										.	.	.	.	.	.	.	.
Query Sequence		N	P	V	V	V	S	A	V	Q	N	Q	L	.	A	K	Q	P	L	H	S	Q	E	.	.	.	.	.	.	.	.	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K
Query Conservation														.										.	.	.	.	.	.	.	.
Alig confidence														.										.	.	.	.	.	.	.	.																												.															.	.	.	.	.	.
Template Conservation																																																											.															.	.	.	.	.	.
Template Sequence		S	R	A	V	M	E	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	E	H	A	N	V	Q	P	H	.	S	G	A	Q	A	N	M	A	V	Y	F	T	V	L	.	.	.	.	.	.	E	H
Template Known Secondary structure										T	S	G	G	G	G							T	T			S	S	S																							S							S	.	S														.	.	.	.	.	.		T
Template Predicted Secondary structure																																																											.															.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P
Query Conservation
Alig confidence																																									.														.	.	.	.	.	.											.										.
Template Conservation																																									.														.	.	.	.	.	.											.										.
Template Sequence		G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y	G	V	D	P	E	T	.	H	V	I	D	Y	D	D	V	R	E	K	A	R	.	.	.	.	.	.	L	H	R	P	K	L	I	V	A	A	.	A	S	A	Y	P	R	I	I	D	.
Template Known Secondary structure		T								G	G	G	T			G	G	G	T		T	T	S						S							B		T	T	T	.		S	B											.	.	.	.	.	.					S						.		S	S			S				.
Template Predicted Secondary structure																																									.														.	.	.	.	.	.											.										.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	.	.	N	P	F	L
Query Conservation																																																																												.	.
Alig confidence		.	.	.																																						.	.																																	.	.
Template Conservation		.	.	.																																						.	.
Template Sequence		.	.	.	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y	.	.	A	H	F	V	T	T	T	T	H	K	T	L	R	G	P	R	G	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	I
Template Known Secondary structure		.	.	.												T								T	T	T						T	T	S	S			S	T	T	T	.	.		S						S	S	S	T	T				S																			T	T	T	T
Template Predicted Secondary structure		.	.	.																																						.	.
Template SS confidence
					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M
Query Conservation
Alig confidence																																																	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		Q	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q	N	E	G	F	.	.	.	T	L	V	S	G	G	T	D	N	H	L	L	L	V	D	L	R	P	Q	Q	L	T	G	K	T	A	E	K	V	L
Template Known Secondary structure			S	S																		S																								T	T		.	.	.			G	G	G	S		S	S	S							G	G	G	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.									.	.	.	.	.	.	.	430					.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		F	R	Q	R	V	L	V	A	G	T	L	N	N	A	.	.	.	.	.	.	.	.	K	T	I	R	I	E	P	P	.	.	.	.	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R	V	S
Query Conservation																.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	F	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E	M	D	E	I	A	A	I	I	G	L	V	L	K	N	V	G	S	E
Template Known Secondary structure					T									T	T		S	S		T	T	T		S												T	T																		T		T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions