Job Description P42588 Confidence 99.95% Date Thu Jan 5 12:01:35 GMT 2012 Rank 61 Aligned Residues 342 % Identity 15% Template d1js3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.25

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.												.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	.	.	.	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	.	.	.	.	.	.	.	.	.	.	.	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A
Query Conservation																																		.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.																.	.			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.
Template Sequence		F	A	Y	F	P	T	A	S	S	Y	P	A	M	L	A	D	M	L	C	G	A	I	G	C	I	G	F	S	W	A	A	S	P	A	C	T	E	L	E	T	V	M	M	D	W	L	G	K	M	L	.	.	Q	L	P	E	A	F	L	A	G	E	A	G	E	G	G	G	V	I	Q	G	S	A	S	E	A	T	L	V
Template Known Secondary structure			S	S	S																							S	S	G	G	G																			T	.	.	T			G	G	G			T	T	T		S							S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		157	.	.	160	.	.	.	.	.														.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Query Sequence		A	L	K	L	A	K	A	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	.	.	.	.	.	N	I	E	A	M
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	L	A	A	R	T	K	V	V	R	R	L	Q	A	A	S	P	G	L	T	Q	G	A	V	L	E	K	L	V	A	Y	A	S	D	Q	A	H	S	S	V	E	R	A	G	L	I	G	G	V	K	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	I	P	S	D	G	K	F	A	M	R	A	S	A	L
Template Known Secondary structure																		S	T	T																T	T													T			.	.	.	.	.	.	.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.													.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	.	P	D	I	L	C
Query Conservation																																																																												.
Alig confidence																																	.	.	.	.																																								.
Template Conservation																																	.	.	.	.
Template Sequence		Q	E	A	L	E	R	D	K	A	A	G	L	I	P	F	F	V	V	A	T	L	G	T	T	S	C	C	S	F	D	N	.	.	.	.	L	L	E	V	G	P	I	C	H	E	E	D	I	W	L	H	V	D	A	A	Y	A	G	S	A	F	I	C	P	E	F	R	H	L	L	N	G	V	E	F	A	D	S	F	N
Template Known Secondary structure											T	T										B	S		T	T	T			B			.	.	.	.											T	T								T	T	G	G	G	G	G	G	S	T	T	T	G	G	G	G	T	T	G	G	G		S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		298	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.									320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																		.	.	.	.	.	.	.	.
Query SS confidence							.																		.	.	.	.	.	.	.	.
Query Sequence		L	A	K	A	L	.	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	.	.	.	.	.	.	.	.	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D
Query Conservation							.																		.	.	.	.	.	.	.	.
Alig confidence							.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	P	H	K	W	L	L	V	N	F	D	C	S	A	M	W	V	K	R	R	T	D	L	T	G	A	F	K	S	G	L	I	T	D	Y	R	H	W	Q	L	P	L	G	R	R	F	R	S	L	K	M	W	F	V	F	R	M	Y	G	V	K	G	L	Q	A	Y	I	R	K	H	V	Q	L	S	H	E	F	E	A
Template Known Secondary structure								S	S			S	S							S							G	G	G				S				G	G	G	S	S	S		S					T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.			420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																													.																									.	.											.
Query SS confidence																													.																									.	.											.
Query Sequence		G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	.	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	.	.	N	N	A	K	T	I	R	I	E	P	.	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A
Query Conservation																													.																									.	.											.
Alig confidence							.	.	.	.																			.																									.	.											.
Template Conservation							.	.	.	.
Template Sequence		F	V	L	Q	D	.	.	.	.	P	R	F	E	V	C	A	E	V	T	L	G	L	V	C	F	R	L	K	G	S	D	G	L	N	E	A	L	L	E	R	I	N	S	A	R	K	I	H	L	V	P	C	R	L	R	G	Q	F	V	L	R	F	A	I	C	S	R	K	V	E	S	G	H	V	R	L	A	W	E	H
Template Known Secondary structure							.	.	.	.	T	T					S				S	S							S	S																T	S		B							T	T											T	T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		391	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	K	A	L	A	A	M	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	G	L	A	A	E	L	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		467	.	.	470	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions