Job Description P42588 Confidence 99.79% Date Thu Jan 5 12:01:35 GMT 2012 Rank 209 Aligned Residues 321 % Identity 12% Template d1e5ea_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.18

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	.	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T
Query Conservation																							.
Alig confidence																							.																				.	.																									.	.	.	.	.
Template Conservation																																											.	.																									.	.	.	.	.
Template Sequence		F	V	F	D	N	C	Q	Q	G	G	N	R	F	A	G	Q	E	S	G	Y	I	Y	T	R	L	G	N	P	T	V	S	N	L	E	G	K	I	A	F	L	E	.	.	K	T	E	A	C	V	A	T	S	S	G	M	G	A	I	A	A	T	V	L	T	I	L	K	.	.	.	.	.	A	G	D	H	L	I	S	D
Template Known Secondary structure					S	S									T	T	S	S		S			B	T	T	T																	.	.	T		S						S	S															.	.	.	.	.	T	T
Template Predicted Secondary structure																																											.	.																									.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Sequence		E	C	L	Y	G	C	T	H	A	L	F	E	H	A	L	T	K	F	G	I	Q	.	.	.	.	.	.	.	.	.	V	D	F	I	N	T	A	I	P	G	E	V	K	K	H	M	K	.	.	.	.	.	.	P	N	T	K	I	V	Y	F	E	T	P	A	N	P	T	L	K	I	I	D	.	.	.	.	M	E	R
Template Known Secondary structure		S												T					T	T			.	.	.	.	.	.	.	.	.						T	T	S	T	T								.	.	.	.	.	.	T	T								S	S		T	T	T						.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.
		257	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure								.																																									.
Query SS confidence								.																																									.
Query Sequence		V	R	K	L	C	D	.	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	.	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G
Query Conservation								.																																									.
Alig confidence								.														.	.	.	.																								.
Template Conservation																						.	.	.	.
Template Sequence		V	C	K	D	A	H	S	Q	E	G	V	L	V	I	A	D	N	T	F	C	.	.	.	.	S	P	M	I	T	N	P	V	D	F	G	V	D	V	V	V	H	S	A	T	K	Y	I	N	G	H	T	D	V	V	A	G	L	I	C	G	K	A	D	L	L	Q	Q	I	R	M	V	G	I	K	D	I	T	G	S	V
Template Known Secondary structure								T	S	T	T								T	T	T	.	.	.	.		T	T	T			G	G	G	G	T		S						T	T	T	T	T	T		S	S																				T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.														.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	.	E	I
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																		.	.
Template Sequence		I	S	P	H	D	A	W	L	I	T	R	G	L	S	T	L	.	.	N	I	R	M	K	A	E	S	E	N	A	M	K	V	A	E	Y	L	K	S	H	P	A	V	E	K	V	Y	Y	P	G	F	E	D	H	E	G	H	D	I	A	K	K	Q	M	R	M	Y	G	S	M	I	T	F	I	L	K	S	G	F	E	G
Template Known Secondary structure															T	T		.	.																				T		T	T							T	T		S	S	S	T	T									S	S			S							T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420																										.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	K	L	L	D	N	L	K	L	I	T	L	A	V	S	L	G	G	C	E	S	L	I	Q	H	P	A	S	M	T	H	A	V	V	P	K	E	E	R	E	A	A	G	I	T	D	G	M	I	R	L	S	V	G	I	E	D	A	D	E	L	I	A	D	F	K	Q	G	L	D	A	L	L	R
Template Known Secondary structure								T		S	S	S			S	S				S	S	S						G	G	G	T	T	T	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions