Job Description P42588 Confidence 99.96% Date Thu Jan 5 12:01:35 GMT 2012 Rank 59 Aligned Residues 360 % Identity 11% Template d1c7na_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.90

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		70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140
Predicted Secondary structure											.	.	.	.	.	.	.																																																											.	.
Query SS confidence											.	.	.	.	.	.	.																																																											.	.
Query Sequence		A	G	S	L	N	T	L	V	D	.	.	.	.	.	.	.	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	.	.	T	P	G	K
Query Conservation											.	.	.	.	.	.	.																																																											.	.
Alig confidence											.	.	.	.	.	.	.													.	.						.																																							.	.
Template Conservation																														.	.						.
Template Sequence		K	N	L	G	S	L	K	W	D	L	M	Y	S	Q	N	P	E	V	G	N	E	V	V	P	L	S	V	A	.	.	D	M	E	F	K	.	N	P	P	E	L	I	E	G	L	K	K	Y	L	D	E	T	V	L	G	Y	T	G	P	T	E	E	Y	K	K	T	V	K	K	W	M	K	D	R	H	Q	W	D	I	Q
Template Known Secondary structure		T	T	T	T												T	T			T	T						S	S	.	.	S		S	S		.																			S	S
Template Predicted Secondary structure																														.	.						.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T
Query Conservation
Alig confidence																									.	.	.	.	.															.																											.	.	.	.
Template Conservation																									.	.	.	.	.															.																											.	.	.	.
Template Sequence		T	D	W	I	I	N	T	A	G	V	V	P	A	V	F	N	A	V	R	E	F	T	K	.	.	.	.	.	P	G	D	G	V	I	I	I	T	P	V	Y	Y	P	.	F	F	M	A	I	K	N	Q	E	R	K	I	I	E	C	E	L	L	E	K	D	G	Y	Y	T	I	.	.	.	.	D	F	Q	K	L	E	K
Template Known Secondary structure		G	G	G					S	S															.	.	.	.	.	T	T							S	S			T		.							T	T	T												T	T					.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.															.																											.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.							.	.	.	290	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	.	.	.	.	.	.	E	H	E	N	V	Q	P	D
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																																																										.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		L	S	K	.	.	.	.	.	.	D	K	N	N	K	A	L	L	F	C	S	P	H	N	P	V	G	R	V	W	K	K	D	E	L	Q	K	I	K	D	I	V	L	K	S	D	L	M	L	W	S	D	E	I	H	F	D	L	I	M	P	G	Y	E	H	T	V	F	Q	S	I	D	E	Q	L	A	D	K	T	I	T
Template Known Secondary structure				T	.	.	.	.	.	.		T	T								S	S	B	T	T	T	T	B																	S	S								T	T	T	T		B		T	T						G	G	G	S						T	T
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		159	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	.	.	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q
Query Conservation																																																												.	.
Alig confidence																																																												.	.
Template Conservation
Template Sequence		F	T	A	P	S	K	T	F	N	I	A	G	M	G	M	S	N	I	I	I	K	N	P	D	I	R	E	R	F	T	K	S	R	D	A	T	S	G	M	P	F	T	T	L	G	Y	K	A	C	E	I	C	Y	K	E	C	G	K	W	L	D	G	C	I	K	V	I	D	K	N	Q	R	I	V	K	D	F	F	E	V
Template Known Secondary structure					S					T		G	G	G																							T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.					.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																											.															.											.	.	.	.
Query SS confidence																											.															.											.	.	.	.
Query Sequence		L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	.	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	.	R	V	L	V	A	G	T	L	N	N	.	.	.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R
Query Conservation																											.															.											.	.	.	.
Alig confidence			.	.	.																						.															.											.	.	.	.										.	.
Template Conservation			.	.	.																																																													.	.
Template Sequence		N	.	.	.	H	P	E	I	K	A	P	L	I	E	G	T	Y	L	Q	W	I	D	F	R	A	L	K	M	D	H	K	A	M	E	E	F	M	I	H	K	A	Q	I	F	F	D	E	G	Y	I	F	G	D	G	G	I	G	F	E	R	I	N	L	A	.	.	A	P	S	S	V	I	Q	E	S	L	E	R	L	N
Template Known Secondary structure			.	.	.		T	T	S	B					S	B	S	S							G	G	G														T	T							G	G	G	G		G	G	G	T	T								.	.	S
Template Predicted Secondary structure			.	.	.																																																													.	.
Template SS confidence
		313				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.
		447	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	A	A	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	K	D	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions