Job Description P42588 Confidence 99.97% Date Thu Jan 5 12:01:35 GMT 2012 Rank 51 Aligned Residues 351 % Identity 14% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.																	.	.																.	.
Template Conservation																			.	.	.	.	.	.	.																	.	.																.	.
Template Sequence		K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	.	.	.	.	.	.	.	D	K	Q	W	A	G	M	M	I	G	D	E	A	Y	A	G	.	.	S	E	N	F	Y	H	L	E	K	T	V	K	E	L	F	.	.	G	F	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L
Template Known Secondary structure		G	G		S				S		S	S	S						.	.	.	.	.	.	.							T	T	S					S	S	S	.	.																.	.			S						S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.																	.	.																.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	.	.	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E
Query Conservation																																																				.	.
Alig confidence				.	.	.	.	.	.																																											.	.																		.	.
Template Conservation				.	.	.	.	.	.																																																														.	.
Template Sequence		A	I	.	.	.	.	.	.	K	P	G	Q	Y	V	A	G	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	D	L	N	K	L	A	T	L	I	K	E	K	G	A	.	.	E	N	I	A	Y	I	C	L	A
Template Known Secondary structure				.	.	.	.	.	.		T	T						S	S												T	T							B		G	G	G	G		T	T				S		T	T		B														G	.	.	G	G
Template Predicted Secondary structure				.	.	.	.	.	.																																																														.	.
Template SS confidence
		110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.													.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V
Template Known Secondary structure		S	S	B	T	T	T	T	S	B																		T								T	T												S	T	T		T	T	S											T	T		S						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		307	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		M	P	I	G	A	T	I	A	T	.	.	.	.	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																																																											.	.				.
Template Conservation																																																																									.	.				.
Template Sequence		N	I	G	G	F	L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	R	E	A	.	.	G	V	P	.	I	V	E
Template Known Secondary structure		S	S							S																T			T	T	T	T	T																	T																						T	.	.	T			.	B		S
Template Predicted Secondary structure																																																																									.	.				.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.		.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.								.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.																420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	.	.	.	.	.	.	.	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	A	K	T	I	R	I	E	.	P	P	L	T	L	T	I	E	Q	C	E
Query Conservation																		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		P	T	G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D
Template Known Secondary structure		S			S	S											T	T	S		G	G	G															S							S						B		S	S	S			B				S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	K	A	A	R	K	A	L	A	A	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	D	G	I	I	K	L	Y	Q	H	K	E
Template Known Secondary structure												T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions