Job Description P42588 Confidence 99.84% Date Thu Jan 5 12:01:35 GMT 2012 Rank 180 Aligned Residues 352 % Identity 12% Template d1ajsa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.60

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																					.	.	.	.	.	.	.	.
Query SS confidence																									.	.																																					.	.	.	.	.	.	.	.
Query Sequence		D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	.	.	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	.	.	.	.	.	.	.	.	T	P	G	K	L	K	Y	S	F	F	C
Query Conservation																									.	.																																					.	.	.	.	.	.	.	.
Alig confidence								.																	.	.																																					.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		D	P	D	P	R	K	.	V	N	L	G	V	G	A	Y	R	T	D	D	C	Q	P	W	V	L	P	V	V	R	K	V	E	Q	R	I	A	N	N	S	S	L	N	H	E	Y	L	P	I	L	G	L	A	E	F	R	T	C	A	S	R	L	A	L	G	D	D	S	P	A	L	Q	E	K	R	V	G	G	V	Q	S
Template Known Secondary structure					T	T		.					S						T	T	S																	T		T	T								T	T																T	T						T	T
Template Predicted Secondary structure								.
Template SS confidence
		27	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	.	.	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C
Query Conservation																					.	.
Alig confidence																					.	.																																												.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		L	G	G	T	G	A	L	R	I	G	A	E	F	L	A	R	W	Y	N	G	T	N	N	K	D	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	G	V	F	T	T	A	G	F	K	D	I	R	S	Y	R	Y	W	D	T	E	K	R	G	L	D	.	.	.	.	.	.	.	.	L	Q	G	F	L	S	D	L
Template Known Secondary structure																			S	S	S	S	S				S							S			T									T	T		S										T	T	T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.								.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	.	.	.	.	.	.	.	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence																						.																																						.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		E	N	A	P	E	F	S	I	F	V	L	H	A	C	A	H	N	P	T	G	.	T	D	P	T	P	E	Q	W	K	Q	I	A	S	V	M	K	R	R	F	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	N	L	E	K	D	A	W	A	I	R	Y	F	V	S	E	G	F	E	L	F	C	A	Q	S	F
Template Known Secondary structure				S		T	T							S	S	S		T	T	T		.																			T								S		T	T	T	T	T	S						T									T	T
Template Predicted Secondary structure																						.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.								.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.									.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	.	.	.	.	.	.	.	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	.	.	.	.	.	.	.	.	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G
Query Conservation																			.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.								.	.																									.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		S	K	N	F	G	L	Y	N	E	R	V	G	N	L	T	V	V	A	K	E	P	D	S	I	L	R	V	L	S	Q	M	.	.	Q	K	I	V	R	V	T	W	S	N	P	P	A	Q	G	A	R	I	V	A	R	T	L	S	D	P	E	L	F	H	E	W	T	G	N	V	K	T	M	A	D	R	I	L	S	M	R
Template Known Secondary structure		T	T	T	S			G	G	G										S	S												.	.						T	T	T	S	S			S												S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K
Query Conservation
Alig confidence																.																			.	.	.	.																				.	.	.	.	.	.					.
Template Conservation																.																			.	.	.	.																				.	.	.	.	.	.					.
Template Sequence		S	E	L	R	A	R	L	E	A	L	K	T	P	G	.	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	G	L	N	.	.	.	.	P	K	Q	V	E	Y	L	I	N	Q	K	H	I	Y	L	L	P	S	G	.	.	.	.	.	.	R	I	N	M	.	C	G	L	T	T	K	N	L	D	Y	V	A	T
Template Known Secondary structure											T	T		S	S	.										S	S								.	.	.	.										T	T						T	T	S	.	.	.	.	.	.				G	.	G	G			T	T	T
Template Predicted Secondary structure																.																			.	.	.	.																				.	.	.	.	.	.					.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.							.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.
		444	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	K	A	L	A	A	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	H	E	A	V	T	K	I	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions