Job Description P42588 Confidence 99.83% Date Thu Jan 5 12:01:35 GMT 2012 Rank 188 Aligned Residues 301 % Identity 13% Template c3qi6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99 Resolution 1.91 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S
Query Conservation
Alig confidence																									.	.																									.	.	.	.	.
Template Conservation																									.	.																									.	.	.	.	.
Template Sequence		G	Y	E	Y	A	R	T	G	N	P	T	R	T	A	L	E	A	A	L	A	A	V	E	.	.	D	A	A	F	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	L	R	.	.	.	.	.	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G	W
Template Known Secondary structure		T	B		B	T	T	T																T	.	.	T		S						S	S															.	.	.	.	.	T	T							T	T												T	G	G	G	G
Template Predicted Secondary structure																									.	.																									.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Sequence		N	V	E	.	.	.	.	.	.	.	.	.	Y	T	P	V	A	L	A	D	L	D	A	V	R	A	A	I	R	.	.	.	.	.	.	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	.	.	.	.	I	A	G	I	A	Q	L	G	A	D	S	S	A	K	V	L	V	D	N	T	F
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.						T	T											.	.	.	.	.	.	T	T								S	S		T	T	T						.	.	.	.											T	T								T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		126	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		A	.	.	.	.	S	P	A	L	Q	Q	P	L	S	L	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K	T	L	V	L	R	M	Q
Template Known Secondary structure		T	.	.	.	.		T	T	T			G	G	G	G	T		S										S		S	S										S																																T	T
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		187					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.											.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.										.																										.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.										.																										.	.
Query Sequence		L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	.	.	.	.	.	.	.	.	.	.	G	M	L	M	A	I	E	F	V	.	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.										.																										.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.										.																										.	.
Template Conservation
Template Sequence		R	H	S	E	N	A	A	A	V	A	E	F	L	A	E	H	P	A	I	S	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	G	R	T	A	A	E	Q	L	C	A	K	T	N	I	F	I	L	A	E	S	L	G	S	V	E	S	L
Template Known Secondary structure																T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T													S	S	S				S					S	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
																	422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S	V	G	I	.	.	.	.	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure					T	T	T					S					T	T								S	.	.	.	.	S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions