Job Description P42588 Confidence 99.97% Date Thu Jan 5 12:01:35 GMT 2012 Rank 52 Aligned Residues 329 % Identity 13% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	.	.	.	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F
Query Conservation																									.	.	.
Alig confidence				.																					.	.	.																			.	.																											.	.	.	.
Template Conservation				.																																										.	.																											.	.	.	.
Template Sequence		G	H	.	G	K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	.	.	G	X	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L	R	I	W	S	D	E	T	.	.	.	.	D	N	R	T
Template Known Secondary structure		B	S	.	S												T	T	S		T	T						T	T			T	T												T	.	.	T		S						S																		.	.	.	.	T
Template Predicted Secondary structure				.																																										.	.																											.	.	.	.
Template SS confidence
		17	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	.	.	.	.	.	.	.	.	.	T	I	L	V	G	A	A	D	R	L	X	T	L	D	E	I	K	A	L	.	.	.	.	P	D	I	A	C	L	L	L	E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E
Template Known Secondary structure						T	T						S	S	T	T						S	S			.	.	.	.	.	.	.	.	.					S		T	T	S											.	.	.	.		S		S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.										.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		L	E	T	I	S	R	Y	C	R	E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	S	I	Y	I	S	F	Y	G	L	G	G	.	I	A	G	A	I	L	A	G	P	A	A	F	C	Q	T	A	R	I	W	K	R	R	Y	G	G	D	L
Template Known Secondary structure													T								T	T									T								T	T		S												.	S	S																						T
Template Predicted Secondary structure																																																						.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V
Query Conservation
Alig confidence																						.	.																							.
Template Conservation																						.	.																							.
Template Sequence		I	S	L	Y	P	Y	I	V	S	A	D	Y	Y	Y	E	L	R	K	D	R	.	.	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	.	T	T	P	E	V	P	V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I	S	P	K	L	E	Q	V	Q	E	E	T	G	L
Template Known Secondary structure		S																	T	T		.	.																		S	T	T			.			S	S	S		S	S	S								S
Template Predicted Secondary structure																						.	.																							.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		414	.	.	.	.	.				420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.												.	.	.
Query SS confidence								.	.	.												.	.	.
Query Sequence		L	V	A	G	T	L	.	.	.	N	N	A	K	T	I	R	I	E	P	P	.	.	.	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L
Query Conservation								.	.	.												.	.	.
Alig confidence								.	.	.												.	.	.
Template Conservation
Template Sequence		G	F	V	G	Y	L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A	F
Template Known Secondary structure			S		S						S	S								B						T	S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions