Job Description P42588 Confidence 100.00% Date Thu Jan 5 12:01:35 GMT 2012 Rank 6 Aligned Residues 403 % Identity 28% Template c3lv2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin Resolution 2.18 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		L	N	R	E	V	I	E	Y	F	K	E	H	V	N	P	G	F	L	E	Y	R	K	S	V	T	A	G	G	D	Y	G	A	V	E	W	Q	A	G	S	L	N	T	L	V	.	.	.	D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q
Query Conservation																																														.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	E	Q	I	I	A	V	D	G	A	H	L	W	H	P	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	V	A	V	A	A	H	G	A	W	L	T	L	I	R	D	G	Q	P	I	E	V	L	D	A	M	S	S	W	W	T	A	I	H	G	H	G	H	P	A	L	D	Q	A	L	T	T	Q
Template Known Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.									B	T							T	T								T	T					T		T	T		B	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.														.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		111	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure									.																																																				.	.	.
Query SS confidence									.																																																				.	.	.
Query Sequence		L	A	K	Q	P	L	H	.	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	.	.	.	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G
Query Conservation									.																																																				.	.	.
Alig confidence									.																																																				.	.	.
Template Conservation
Template Sequence		L	R	V	M	N	H	V	M	F	G	G	L	T	H	E	P	A	A	R	L	A	K	L	L	V	D	I	T	P	A	G	L	D	T	V	F	F	S	D	S	G	S	V	S	V	E	V	A	A	K	M	A	L	Q	Y	W	R	G	R	G	L	P	G	K	R	R	L	M	T	W	R	G	G	Y	H	G	D	T	F	L
Template Known Secondary structure						S				S	S	S																	S	S	T	T								S	S																		T	T	T		T	T								T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																												.	.	.	.	.																												.
Query SS confidence																												.	.	.	.	.																												.
Query Sequence		A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	.	.	.	.	.	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	.	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L
Query Conservation																												.	.	.	.	.																												.
Alig confidence																												.	.	.	.	.																												.
Template Conservation
Template Sequence		A	M	S	I	C	D	P	H	G	G	M	H	S	L	W	T	D	V	L	A	A	Q	V	F	A	P	Q	V	P	R	D	Y	D	P	A	Y	S	A	A	F	E	A	Q	L	A	Q	H	A	G	E	L	A	A	V	V	V	E	P	V	V	Q	G	A	G	G	M	R	F	H	D	P	R	Y	L	H	D	L	R	D	I
Template Known Secondary structure				T	T	S		T	T	T	T	T	G	G	G	T		S	S	S											S	S																	G	G	G								S	S				T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	.	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A
Query Conservation																																																																		.
Alig confidence																																																																		.
Template Conservation
Template Sequence		C	R	R	Y	E	V	L	L	I	F	D	E	I	A	T	G	F	G	R	T	G	A	L	F	A	A	D	H	A	G	V	S	P	D	I	M	C	V	G	K	A	L	T	G	G	Y	L	S	L	A	A	T	L	C	T	A	D	V	A	H	T	I	S	A	G	A	A	L	M	R	G	P	T	F	M	A	N	P	L	A
Template Known Secondary structure					T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T				S						G	G	G	G	T	T	S	S																		S					S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L
Query Conservation
Alig confidence																																				.					.
Template Conservation																																				.					.
Template Sequence		C	A	V	S	V	A	S	V	E	L	L	L	G	Q	D	W	R	T	R	I	T	E	L	A	A	G	L	T	A	G	L	D	T	A	.	R	A	L	P	.	A	V	T	D	V	R	V	C	G	A	I	G	V	I	E	C	D	R	P	V	D	L	A	V	A	T	P	A	A	L	D	R	G	V	W	L	R	P	F	R
Template Known Secondary structure														T	S																		G	G	G	.	G	G	S	T	.	T								S	S							S	S													T	T	T						B	T
Template Predicted Secondary structure																																				.					.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R	V
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	N	L	V	Y	A	M	P	P	Y	I	C	T	P	A	E	I	T	Q	I	T	S	A	M	V	E	V	A	R	L	V	G	S
Template Known Secondary structure		.	.	.	T								T	T																						S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.