Job Description P42588 Confidence 99.95% Date Thu Jan 5 12:01:35 GMT 2012 Rank 67 Aligned Residues 350 % Identity 11% Template c3kaxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative c-s lyase from bacillus anthracis Resolution 1.70 Å

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		77	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure					.																																																										.	.
Query SS confidence					.																																																										.	.
Query Sequence		V	D	T	.	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	.	.	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S
Query Conservation					.																																																										.	.
Alig confidence					.									.	.										.																																						.	.
Template Conservation														.	.										.
Template Sequence		W	D	T	Y	K	N	E	E	L	I	H	A	.	.	W	I	A	D	X	D	F	E	V	.	P	Q	P	I	Q	T	A	L	K	K	R	I	E	H	P	I	F	G	Y	T	L	P	P	E	N	I	G	D	I	I	C	N	W	T	K	K	Q	Y	N	W	D	I	Q	K	E	W	I	V	F	S	A	G	I	V	P	A
Template Known Secondary structure				T	T	T	T	S						.	.			S	S		S	S			.													T	S										T	T																			G	G	G					S
Template Predicted Secondary structure														.	.										.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A
Query Conservation
Alig confidence											.	.	.	.	.	.																																										.	.	.	.											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.																																										.	.	.	.											.	.	.	.	.	.
Template Sequence		L	S	T	S	I	Q	A	F	T	.	.	.	.	.	.	K	E	N	E	S	V	L	V	Q	P	P	I	Y	P	P	F	F	E	X	V	T	T	N	N	R	Q	L	C	V	S	P	L	Q	K	Q	N	D	T	Y	A	I	.	.	.	.	D	F	E	H	L	E	K	Q	F	Q	.	.	.	.	.	.	Q	G	V	K
Template Known Secondary structure											.	.	.	.	.	.		T	T							S	S												T	T									B		S	S	S	S		B		.	.	.	.											.	.	.	.	.	.	T	T
Template Predicted Secondary structure											.	.	.	.	.	.																																										.	.	.	.											.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.							.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.							.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	.	.	.	.	.	.	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M
Query Conservation																																																							.	.	.	.	.	.
Alig confidence																	.																																						.	.	.	.	.	.
Template Conservation																	.
Template Sequence		L	X	L	L	C	S	P	H	N	P	I	G	R	V	W	.	K	K	E	E	L	T	K	L	G	S	L	C	T	K	Y	N	V	I	V	V	A	D	E	I	H	S	D	I	I	Y	A	D	H	T	H	T	P	F	A	S	L	S	E	E	L	A	A	R	T	I	T	C	X	A	P	S	K	T	F	N	I	A	G	L
Template Known Secondary structure							S	S	B	T	T	T	T	B			.															T	T								T	T	T	T		B		T	T						G	G	G	S						T	T							S	S	T	G	G	G		G	G	G
Template Predicted Secondary structure																	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		Q	A	S	I	I	I	I	P	N	E	K	L	R	Q	A	F	T	S	I	Q	Y	R	Q	G	F	H	G	L	N	I	F	A	Y	T	A	X	Q	S	A	Y	T	E	C	.	N	D	W	L	N	E	I	R	F	Y	I	E	D	N	A	K	F	A	C	E	Y	I	K	D	H	I	P	T	L	S	V	X	K	P	E	G
Template Known Secondary structure																								T	T																T	T	S		.																											T	T							S	B
Template Predicted Secondary structure																																													.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.					.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.														.											.	.	.	.
Query SS confidence													.														.											.	.	.	.
Query Sequence		G	M	L	M	A	I	E	F	V	D	N	.	E	I	G	Y	N	F	A	S	E	M	F	R	Q	.	R	V	L	V	A	G	T	L	N	N	.	.	.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L
Query Conservation													.														.											.	.	.	.
Alig confidence													.														.											.	.	.	.							.	.
Template Conservation																																																.	.
Template Sequence		S	F	L	L	W	I	D	C	S	A	L	N	L	S	Q	D	E	R	T	K	L	L	E	E	K	G	K	I	I	V	E	P	G	E	K	Y	G	L	G	G	E	E	H	I	G	I	.	.	N	I	G	C	P	R	S	V	L	E	E	I	L	N	R	L	R	H	T	F
Template Known Secondary structure		S	S							G	G	G															S							S	G	G	G		T	T	T	T	T					.	.			S	S																T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions