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Job DescriptionP42588
Confidence99.87%DateThu Jan 5 12:01:35 GMT 2012
Rank154Aligned Residues329
% Identity12%Templatec3ihjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130...... ...140.........150.........160......... 170........
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Query Sequence  SAVQNQLAKQPLHSQELLDPLRAMLAKTLAAL. . . TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG. . . KFTFIATSG
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Template Sequence  EDAKKRARRILQACSQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKIL. . . . VSGGGKSRTGVMIPIP
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   129130.........140.........150.........160.........170.........180........ .190.........200....
 
   179180.........190.........200.........210. ........220.........230.........240.........250.
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Query Sequence  AFHGKSLGALSATAKSTFRKPFMPLLPGFRHVP. . . . . . . FGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPP
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Template Sequence  QYPLYSAVISELDAI. . . . . . . . . . . . . QVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINP. GNPTG. QVQSR
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BGGGTTB

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   215....220......... 230.........240.........250.........260......... 270.... .....
 
   252.......260.........270.........280.........290.... .....300.. .......310.......
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Query Sequence  GYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPD. . . . . . . . . . . . . ILCLAKAL. GGGVMPIGATIATEE
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Template Sequence  KCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINL
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TTTT
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   280.........290.........300.........310.........320.........330.........340.........350.........
 
   318.320.........330.........340.........350 .........360.........370.........380.........
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Query Sequence  VFSVLFDNPFLHTTTFGGNPLACAAALATINVL. . . . . . . . LEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGM
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Template Sequence  HPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAM
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   360.........370.........380.........390.........400.........410.........420.........430.........
 
   390.........400....... ..410.........420.. .......430.........440.........450.
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Query Sequence  LMAIEFVDNEIGYNFASE. . . . . . . . . . . . . MFRQRVLVAGTLNNA. . . . . KTIRIEPPLTLTIEQCELVIKAARKALAA
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Template Sequence  YAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMT. . ILPPVEKLKTVLQKVKDFHIN
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TTS

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GGGT


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   440.........450.........460.........470.........480.........490...... ...500.........510.......
 
   452..
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Query Sequence  MRV
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Template Conservation     
Template Sequence  FLE
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   518.520
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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