Job Description P42588 Confidence 99.89% Date Thu Jan 5 12:01:35 GMT 2012 Rank 133 Aligned Residues 317 % Identity 12% Template c3hl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex Resolution 2.81 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	.	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P
Query Conservation																		.
Alig confidence																		.																												.	.
Template Conservation																																														.	.
Template Sequence		K	I	T	N	S	L	V	L	D	I	I	K	L	A	G	V	H	T	V	A	N	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	.	.	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	I	T	A	G	F	E	P	V	V	I	E	N	V	L
Template Known Secondary structure																T		T	T								S	S																		.	.	T	T																					T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K
Query Conservation
Alig confidence									.	.	.	.															.	.																					.	.	.	.
Template Conservation									.	.	.	.															.	.																					.	.	.	.
Template Sequence		E	G	D	E	L	R	T	.	.	.	.	D	L	K	A	V	E	A	K	V	Q	E	L	G	P	.	.	D	C	I	L	C	I	H	S	T	T	S	C	F	A	P	R	V	P	D	R	.	.	.	.	L	E	E	L	A	V	I	C	A	N	Y	D	I	P	H	I	V	N	N	A	Y	G	V	Q	S	S	K	C	M
Template Known Secondary structure			T	T					.	.	.	.														G	.	.	G	G								S	S			T	T	B					.	.	.	.												T								T	T		T	T
Template Predicted Secondary structure									.	.	.	.															.	.																					.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		283	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure												.											.
Query SS confidence												.											.
Query Sequence		M	F	A	C	E	H	E	N	V	Q	.	P	D	I	L	C	L	A	K	A	L	.	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E
Query Conservation												.											.
Alig confidence												.											.																						.
Template Conservation																																													.
Template Sequence		H	L	I	Q	Q	G	A	R	V	G	R	I	D	A	F	V	Q	S	L	D	K	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	D	S	F	I	Q	E	I	.	S	K	M	Y	P	G	R	A	S	A	S	P	S	L	D	V	L	I	T	L	L	S	L	G	S	N	G	Y	K	K	L	L	K	E	R	K
Template Known Secondary structure											S													S				S	S							S									.			T	S		S		B		S
Template Predicted Secondary structure																																													.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.						.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.																		.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	.	.	.	.	.	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	G	T
Query Conservation																																					.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	M	F	S	Y	L	S	N	Q	I	K	K	L	S	E	A	Y	N	E	R	L	L	H	T	P	H	N	P	I	S	L	A	M	T	L	K	T	L	D	E	H	R	D	K	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	V	V	P	L	G	S	M	Q	T	V	S	G	Y	T	F	R	G	F
Template Known Secondary structure																		T	T			B				T	T		S	S							T	T			T	T	T	S													T	T			S						S	S						T	T					S	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		419	420	.	.	.						.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		L	N	N	A	K	.	.	.	.	.	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		M	S	H	T	N	N	Y	P	C	A	Y	L	N	A	A	S	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D	R	C	L	K	A	V	R
Template Known Secondary structure		T	T	T	S	S			S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions