Job Description P42588 Confidence 21.30% Date Thu Jan 5 12:01:35 GMT 2012 Rank 373 Aligned Residues 45 % Identity 13% Template c3h9dB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:microtubule-associated protein 1a/1b, light chain 3, PDBTitle: crystal structure of trypanosoma brucei atg8 Resolution 2.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	T	L	D	H	E	E	M	K	A	L	N	R	E	V	I	E	Y	F	K	E	H	V	N	P	G	F	L	E	Y	R	K	S	V	T	A	G	G	D	Y	G	A	V	E	W	Q	A	G	S	L	N	T	L	V	D	T	Q	G	Q	E	F	I
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	S	H	T	F	E	S	R	Q	S	D	A	A	K	V	R	E	R	H	P	D	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	I	C	E	K	V	Y	N	S	D	I	G	E	L	D	R	C	K	F	L
Template Known Secondary structure					S																	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			S				S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions