Job Description P42588 Confidence 99.72% Date Thu Jan 5 12:01:35 GMT 2012 Rank 217 Aligned Residues 333 % Identity 17% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	.	.	.	.	.	.	.	.	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		F	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A	V	L	H	A	L	M	.	.	.	.	.	.	S
Template Known Secondary structure												T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S														.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	.	.	.	.	.	.	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E
Query Conservation																																														.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																						.	.	.	.	.	.												.	.	.	.	.											.	.
Template Conservation																		.	.	.	.	.	.	.																																							.	.	.	.	.											.	.
Template Sequence		P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	.	.	.	.	.	.	.	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	.	.	.	.	.	F	R	P	K	V	I	I	A	G	W	.	.	S	A
Template Known Secondary structure		T	T								G	G	G	T			G	.	.	.	.	.	.	.	G	G	T		T	T	S					S	S									T	T	T		S													.	.	.	.	.				S							.	.	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.																																							.	.	.	.	.											.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.			.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F
Query Conservation
Alig confidence								.	.	.	.																						.																	.																	.
Template Conservation								.	.	.	.																						.																	.																	.
Template Sequence		Y	P	R	V	L	D	.	.	.	.	F	A	A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	.	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	.	A	D	V	V	S	T	T	V	H	T	L	G	G	G	R	S	.	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N
Template Known Secondary structure				S				.	.	.	.												T								T	T	.	T						T	T	S	S			S	T	T	T	.		S													S		.							G	G	G
Template Predicted Secondary structure								.	.	.	.																						.																	.																	.
Template SS confidence
		175	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.
		324			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																																																															.	.
Query SS confidence			.	.																																																															.	.
Query Sequence		D	.	.	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	.	.	K	G	M	L	M	A	I	E	F	V	D	N	E
Query Conservation			.	.																																																															.	.
Alig confidence			.	.																																																								.							.	.
Template Conservation																																																												.
Template Sequence		S	A	V	F	P	G	Q	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	.	V	S	V	V	S	G	G	T	D	V	H	L	V	L	V	D	L	R	D	S	P
Template Known Secondary structure					T	T	T	T		S	S																	T	S																						S	S						T	T	.				G	G	G	S		S	S	S							T	T	S	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
			400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.									.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450									.	.	.	.	.	.	.	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.																		.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.	.	.	.																		.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		.	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	.	.	.	.	.	.	.	.	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	.	.	.	.	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	.	.	.	.	.	.	.	.	A	M	R	V	S	V	E	E
Query Conservation		.																			.	.	.	.	.	.	.	.																		.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.																		.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L	A	T	G	S	S	V	D	V	S	A	L	K	D	R	A	T	R
Template Known Secondary structure														T	T									T	T		S	S		T	T	T		S													T																			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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