Job Description P42588 Confidence 99.59% Date Thu Jan 5 12:01:35 GMT 2012 Rank 228 Aligned Residues 288 % Identity 13% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																				.	.	.	.																														.	.	.
Query SS confidence																				.	.	.	.																														.	.	.
Query Sequence		V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	.	.	.	.	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	.	.	.	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I
Query Conservation																				.	.	.	.																														.	.	.
Alig confidence																				.	.	.	.																			.	.										.	.	.																.	.	.	.	.
Template Conservation																																										.	.																												.	.	.	.	.
Template Sequence		K	V	L	D	A	F	Q	E	N	K	V	S	D	F	H	F	N	P	S	T	G	Y	G	Y	D	D	E	G	R	D	T	L	E	R	V	Y	A	S	V	F	.	.	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	.	.	.	.	.	P	G	D	E	L	L
Template Known Secondary structure										T	T			G	G	G	G					T	T		T	T																.	.	T		S						T	T	S		S															.	.	.	.	.	T	T
Template Predicted Secondary structure																																										.	.																												.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	.	.	.	.	.	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P
Query Conservation																																									.	.	.	.	.
Alig confidence																					.	.																			.	.	.	.	.											.	.	.	.	.	.
Template Conservation																					.	.																																		.	.	.	.	.	.
Template Sequence		Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	.	.	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	.	.	.	.	.	.	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F
Template Known Secondary structure				S	S	S			T	T						T	S	S		S	.	.	S	S			T	G	G	G	T										T	T	S	S												.	.	.	.	.	.	T	T									S		T	T	S	S	S
Template Predicted Secondary structure																					.	.																																		.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.
Predicted Secondary structure																		.	.																																										.	.																	.	.
Query SS confidence																		.	.																																										.	.																	.	.
Query Sequence		P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	.	.	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	.	.	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	.	.	F
Query Conservation																		.	.																																										.	.																	.	.
Alig confidence																		.	.													.	.	.	.	.																									.	.																	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		T	I	E	K	I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	.	.	.	.	.	V	E	R	I	E	P	T	E	V	G	A	D	I	I	A	G	S	L	I	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	R
Template Known Secondary structure																		T	T	S							T	T	T	T	T	.	.	.	.	.	T	S	S			G	G	G	T	T		S									T	T	T	T	T			S
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N
Query Conservation
Alig confidence																													.	.																																				.
Template Conservation																													.	.																																				.
Template Sequence		L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	L	A	.	.	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	V	E	A	D	P	L	W	D	A	K	R	T	D	.	L	I	Q	S	V	S	F	H	S	K	D	K	X	I	A
Template Known Secondary structure			S		T	T	T	G	G	G					T	T													.	.																					T	T					S		T	T	S			S	S	.	S							S
Template Predicted Secondary structure																													.	.																																				.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	S	E	M	F	R	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	Q	A	I	Q	A	A	S
Template Known Secondary structure									T	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions