 |
Job Description | P42588 | Confidence | 99.92% | Date | Thu Jan 5 12:01:35 GMT 2012 |
Rank | 97 | Aligned Residues | 335 |
% Identity | 12% | Template | c3f0hA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:aminotransferase; |
PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution
|
Resolution | 1.70 Å |
|
 |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | F | I | D | C | L | G | G | F | G | I | F | N | V | G | H | R | N | P | V | V | V | S | A | V | Q | N | Q | L | A | K | Q | P | L | H | S | Q | E | L | L | D | P | L | R | A | M | L | A | K | T | L | A | A | L | . |
. |
T | P | G | K | L | K | Y | S | F | F | C | N | S | G | T | E | S | V | E | A | A | L | K |
Query Conservation |   |
  |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   | . | . |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
| . | . |
|   |   |   | . | . | . |   |   |   |
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
Q | G | X | L | N | F | T | V | G | . |
. |
P | V | X | S | . |
. |
. |
S | E | E | V | R | A | I | G | A | E | Q | V | . |
. |
. |
P | Y | F | R | T | T | E | F | S | S | T | X | L | E | N | E | K | F | X | L | E | Y | A | K | A | P | E | G | S | K | A | V | F | X | T | C | S | S | T | G | S | X | E | A | V | V | X |
Template Known Secondary structure |   |
S | S |
|  |  |
| S | S | S | . | . | S |
|
|
| . | . | . |
|  |  |  |  |  |  |  | T | S |
|
| . | . | . |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|