Job Description P42588 Confidence 99.81% Date Thu Jan 5 12:01:35 GMT 2012 Rank 196 Aligned Residues 304 % Identity 12% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	.	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G
Query Conservation																																																	.
Alig confidence																	.	.						.																.	.								.																.	.	.	.						.
Template Conservation																	.	.						.																.	.																								.	.	.	.						.
Template Sequence		S	R	A	V	L	D	A	Q	G	S	V	L	T	N	K	.	.	Y	A	E	G	Y	.	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	.	.	N	A	G	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	.	.	.	.	A	K	P	G	D	.	T	V	L	G	M	S	L
Template Known Secondary structure										T	S	G	G	G	S	S	.	.		T	T			.															T	.	.	T		S							S	S													.	.	.	.			T	T		.
Template Predicted Secondary structure																	.	.						.																.	.																								.	.	.	.						.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.		.	.	.	110	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.											.	.									.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.											.	.									.	.	.	.
Template Sequence		F	N	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	.	.	.	.	.	H	K	P	S	L	I	I	A	G	F	.	.	S	A	Y	P	R	K	L	D	.	.	.	.	F	A	R	F	R
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		T	T	T		S	B												.	.	.	.	.				S							.	.	S			S	S				.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.											.	.									.	.	.	.
Template SS confidence
		144	.	.	.	.																					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.					.	.	190	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L
Query Conservation
Alig confidence																		.																.																																			.	.	.
Template Conservation																		.																.																																			.	.	.
Template Sequence		A	I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	.	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	.	H	A	H	V	V	T	S	T	T	H	K	T	L	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	.	.	.	A	V	G	P	L	M	H	V	I	A
Template Known Secondary structure							T	T								T	T	.	T						T	T	S	S			G	G	G	.	T		S						S	S	G	G	G		S		S							S											.	.	.
Template Predicted Secondary structure																		.																.																																			.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	.	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G
Query Conservation																																																															.
Alig confidence																																					.	.	.	.																							.
Template Conservation																																					.	.	.	.
Template Sequence		G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	.	.	.	.	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N	K
Template Known Secondary structure											T	S																								T	.	.	.	.	T				G	G	G	S		S	S	S							G	G	G	T													T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		418	.									420	.	.	.	.	.	.	.	.	.	430					.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		T	L	.	.	.	.	.	.	.	.	N	N	A	K	T	I	R	I	E	P	P	.	.	.	.	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R
Query Conservation				.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L	R
Template Known Secondary structure					T	T		S	S		T	T	T		S												T	T																					T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions