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Job DescriptionP42588
Confidence99.81%DateThu Jan 5 12:01:35 GMT 2012
Rank199Aligned Residues321
% Identity13%Templatec3e77A_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NPVVVSAVQNQLAKQPLHSQELLD. . . . . . . . . PLRAMLAKTLAALTPGKLK. YSFFCNS. GTESVEAALKLAKAYQSPR
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Template Sequence  PHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLK. . .
Template Known Secondary structure 
TSSSGGGSSS
TTT

TTST

TTSSGGGS...
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   18.20.........30.........40.........50.........60.........70.........80.........90....
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVIL
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Template Sequence  AGRCADYVVTGAWSAKAAEEAKKFGT. . . . . . . . . . . . INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEF
Template Known Secondary structure  TT



STTTS............
S


SSS
S


GGG



TT
S
STTTT
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   95....100.........110.........120 .........130.........140.........150.........160..
 
   249250.........260.........270.........280.........290.........300.........310........
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Query Sequence  PPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEV. . . . . . . . . .
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Template Sequence  D. . . . . . . . . FIPDVKGAVLVCDMSSN. . . . . . . FLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPS
Template Known Secondary structure  S.........S



TT


TTT.......TTSS


GGG
SGGGTTS
TT
TTS
S


TTS
G
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   163 ......170.........180 .........190.........200.........210.........220......
 
   319320.........330.........340.........350 .........360.........370.........380.........390....
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Query Sequence  . . . FSVLFDNPFLHTTTFGGNPLACAAALATINVL. LEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIE
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Template Sequence  VLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR
Template Known Secondary structure  GG
TTTT
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TTTSTTS

S
GGGB
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   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   395... .400.........410.........420.........430.........440.........450.
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Query Sequence  FVDN. . . . EIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAA
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Template Sequence  IGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM
Template Known Secondary structure  SSTT

TTS
B

TTT
S

TTS
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   307..310.........320.........330.........340.........350.........360.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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