Job Description P42588 Confidence 99.89% Date Thu Jan 5 12:01:35 GMT 2012 Rank 128 Aligned Residues 352 % Identity 14% Template c3e2yB_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine Resolution 2.26 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																	.	.	.																										.	.	.
Query SS confidence																				.	.	.	.	.	.																	.	.	.																										.	.	.
Query Sequence		Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	.	.	.	.	.	.	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	.	.	.	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	.	.	.	L	K	Y	S	F	F	C	N	S
Query Conservation																				.	.	.	.	.	.																	.	.	.																										.	.	.
Alig confidence																				.	.	.	.	.	.																	.	.	.																										.	.	.
Template Conservation
Template Sequence		V	E	F	T	K	L	A	A	D	P	S	V	V	N	L	G	Q	G	F	P	D	I	S	P	P	S	Y	V	K	E	E	L	S	K	A	A	F	I	D	N	M	N	Q	Y	T	R	G	F	G	H	P	A	L	V	K	A	L	S	C	L	Y	G	K	I	Y	Q	R	Q	I	D	P	N	E	E	I	L	V	A	V	G
Template Known Secondary structure				T		S	T	T		S	T	T					S	S					S															T	S	G	G	G	G	S				T	T																		T	S				T	T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	.	.	.	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K
Query Conservation																																																																.	.	.
Alig confidence														.	.	.	.					.																																										.	.	.													.	.	.
Template Conservation														.	.	.	.					.																																																									.	.	.
Template Sequence		A	Y	G	S	L	F	N	S	I	Q	G	L	.	.	.	.	V	D	P	G	.	D	E	V	I	I	M	V	P	F	Y	D	C	Y	E	P	M	V	R	M	A	G	A	V	P	V	F	I	P	L	R	S	K	P	T	D	G	M	K	W	T	S	S	D	W	T	F	D	P	R	E	L	E	S	K	F	S	.	.	.
Template Known Secondary structure														.	.	.	.			T	T	.								S			T	T								T	T															S	S			B	G	G	G														.	.	.
Template Predicted Secondary structure														.	.	.	.					.																																																									.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	.	.	.	.	.	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A
Query Conservation																																																												.	.	.	.	.
Alig confidence		.	.	.																	.																																							.	.	.	.	.
Template Conservation		.	.	.																	.
Template Sequence		.	.	.	S	K	T	K	A	I	I	L	N	T	P	H	N	P	L	G	.	K	V	Y	T	R	Q	E	L	Q	V	I	A	D	L	C	V	K	H	D	T	L	C	I	S	D	E	V	Y	E	W	L	V	Y	T	G	H	T	H	V	K	I	A	T	L	P	G	M	W	E	R	T	I	T	I	G	S	A	G	K	T
Template Known Secondary structure		.	.	.	T	T								S	S		T	T	T		.																			T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G
Template Predicted Secondary structure		.	.	.																	.
Template SS confidence
					207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	V	T	G	W	K	L	G	W	S	I	G	P	A	H	L	I	K	H	L	Q	T	V	Q	Q	N	S	F	Y	T	C	A	T	P	L	Q	A	A	L	A	E	A	F	W	I	D	I	K	R	M	D	D	P	E	C	Y	F	N	S	L	P	K	E	L	E	V	K	R	D	R	M	V	R	L	L	N	S	V	G
Template Known Secondary structure		S	S		G	G	G																					T	T	T																				T	T	T	T	S	T	T	S																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		382	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.												.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.										.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.													.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.
Query SS confidence						.	.													.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	A	R	.	.	G	K	G	M	L	M	A	I	E	F	V	D	.	.	.	.	.	.	.	.	.	.	.	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	.	R	V	L	V	A	G	T	L	N	N	A	.	.	.	.	.	.	.	.	.	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C
Query Conservation						.	.													.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.
Alig confidence						.	.													.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.	.	.	.	.							.	.
Template Conservation																																																																								.	.
Template Sequence		L	K	P	I	V	P	D	G	G	Y	F	I	I	A	D	V	S	S	L	G	A	D	L	S	D	M	N	S	D	E	P	Y	D	Y	K	F	V	K	W	M	T	K	H	K	K	L	T	A	I	P	V	S	A	F	C	D	S	K	S	K	P	H	F	E	K	L	V	R	F	C	.	.	F	I	K	K	D	S	T	L
Template Known Secondary structure						B		S	B	S	S							T	T	S					T	T	T				S															S						G	G	G	G	S		T	T	T					T	T						.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440
		439	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	I	K	A	A	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	A	E	E	I	F	R	A
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions