Job Description P42588 Confidence 99.90% Date Thu Jan 5 12:01:35 GMT 2012 Rank 116 Aligned Residues 319 % Identity 13% Template c3dr4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A
Query Conservation
Alig confidence																							.	.	.															.	.																								.	.	.							.
Template Conservation																							.	.	.															.	.																								.	.	.							.
Template Sequence		D	G	N	E	R	D	Y	V	L	E	C	M	D	T	T	W	I	S	S	V	G	.	.	.	R	F	I	V	E	F	E	K	A	F	A	D	Y	C	.	.	G	V	K	H	A	I	A	C	N	N	G	T	T	A	L	H	L	A	L	V	A	M	G	.	.	.	I	G	P	G	D	E	.	V	I	V	P	S	L	T
Template Known Secondary structure			S	S												T			S	S		S	.	.	.															.	.	T		S						S														T	.	.	.			T	T			.					S	S	S
Template Predicted Secondary structure																							.	.	.															.	.																								.	.	.							.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.		.	80	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Sequence		Y	I	A	S	A	N	S	V	T	Y	C	G	A	T	P	V	L	.	.	.	.	.	.	.	.	.	.	V	D	N	D	P	R	T	F	N	L	D	A	A	K	L	E	A	.	.	.	.	.	.	L	I	T	P	R	T	K	A	I	M	P	V	H	L	Y	G	Q	I	C	D	.	.	.	.	M	D	P	I	L	E
Template Known Secondary structure			T									T	T						.	.	.	.	.	.	.	.	.	.			B		T	T	T		S	B		G	G	G	T	G	G	.	.	.	.	.	.	G			T	T							B		G	G	G					.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.												.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	.	.	.	.	.	.	.	.	.	.	.	D	N	P	F	L
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.								.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.								.
Template Sequence		V	A	R	R	H	N	L	L	V	I	E	D	A	A	E	.	A	V	G	A	T	Y	R	.	G	K	K	S	G	S	L	G	D	C	A	T	F	S	F	F	G	N	A	I	I	T	T	G	E	G	G	M	I	T	T	N	D	D	D	L	A	A	K	M	R	L	L	R	G	Q	G	M	D	P	N	R	R	Y	W	F
Template Known Secondary structure						T	T								T	T	.		T	T				T	.	T			T	T	S	S	S	S							B	T	T	S	S	S			B	S							S													B	T	T			T	T	S	T	T
Template Predicted Secondary structure																	.								.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.			.	.	400	.	.	.	.
Predicted Secondary structure																																																		.	.																						.	.
Query SS confidence																																																		.	.																						.	.
Query Sequence		H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	.	.	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	.	.	N	E	I	G	Y	N	F
Query Conservation																																																		.	.																						.	.
Alig confidence																																																		.	.																						.	.
Template Conservation
Template Sequence		P	I	V	G	F	N	Y	R	M	T	N	I	Q	A	A	I	G	L	A	Q	L	E	R	V	D	E	H	L	A	A	R	E	R	V	V	G	W	Y	E	Q	K	L	A	R	L	G	N	R	V	T	K	P	H	V	A	L	T	G	R	H	V	F	W	M	Y	T	V	R	L	G	E	G	L	S	T	T	R	D	Q	V
Template Known Secondary structure		S	S				B		B															T																			G	G	G	G	G	G	G								T	T	S					S	S							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.																							.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	D	L	D	A	L	G	I	E	S	R	P	V	F	H	P	M	H	I	M	P	P	Y	A	H	L	A	T	D	D	L	K	I	A	E	A	C	G	V	D	G	L	N	L	P	T	H	A	G	L	T	E	A	D	I	D	R	V	I	A	A	L	D	Q	V	L
Template Known Secondary structure								T	T	B									G	G	G	S	G	G	G	G	G	G			T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions