Job Description P42588 Confidence 100.00% Date Thu Jan 5 12:01:35 GMT 2012 Rank 23 Aligned Residues 395 % Identity 31% Template c3dodA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis Resolution 1.90 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	E	Y	F	K	E	H	V	N	P	G	F	L	E	Y	R	K	S	V	T	A	G	G	D	Y	G	A	V	E	W	Q	A	G	S	L	N	T	L	V	D	T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		D	L	I	E	K	S	K	K	H	L	W	L	P	F	T	Q	M	K	D	Y	D	E	.	.	.	.	.	N	P	L	I	I	E	S	G	T	G	I	K	V	K	D	I	N	G	K	E	Y	Y	D	G	F	S	S	V	W	L	N	V	H	G	H	R	K	K	E	L	D	D	A	I	K	K	Q	L	G	K	I	A	H
Template Known Secondary structure														T	T									.	.	.	.	.	S									B	T					T	T	S						T	T					T		S	S		B	S													T	T		S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		117		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure			.																																																					.	.	.
Query SS confidence			.																																																					.	.	.
Query Sequence		H	.	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	.	.	.	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A
Query Conservation			.																																																					.	.	.
Alig confidence			.																																																					.	.	.
Template Conservation
Template Sequence		S	T	L	L	G	M	T	N	V	P	A	T	Q	L	A	E	T	L	I	D	I	S	P	K	K	L	T	R	V	F	Y	S	D	S	G	A	E	A	M	E	I	A	L	K	M	A	F	Q	Y	W	K	N	I	G	K	P	E	K	Q	K	F	I	A	M	K	S	Y	K	A	P	I	P	Y	V	Y	R	S	E	S	G
Template Known Secondary structure					S	S	S																S		T	T								S	S																			T	T		T	T																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	.	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D
Query Conservation																																																	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.											.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		D	P	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	D	Q	C	L	R	E	L	A	Q	L	L	E	E	H	H	.	.	.	E	E	I	A	A	L	S	I	E	S	M	V	Q	G	A	S	G	M	I	V	M	P	E	G	Y	L	A	G	V	R	E	L	C	T	T	Y	D	V	L	M	I	V	D
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																	G	.	.	.	G	G								S	S			S	T	T	T						T	T												T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		188	.	190	.														.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	.	.	.	.	.	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T
Query Conservation																																																					.	.	.	.	.
Alig confidence																																																					.	.	.	.	.
Template Conservation
Template Sequence		E	V	A	T	G	F	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	L	M	A	A	G	K	G	I	T	G	G	Y	L	P	I	A	V	T	F	A	T	E	D	I	Y	K	A	F	Y	D	D	Y	E	N	L	K	T	F	F	H	G	H	S	Y	T	G	N	Q	L	G	C	A	V	A	L	E	N
Template Known Secondary structure			T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S														T	T		S		G	G	G									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400												.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	.	.	.	.	.	.	.	.	.	.	.	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		L	A	L	F	E	S	E	N	I	V	E	Q	V	A	E	K	S	K	K	L	H	F	L	L	Q	D	L	H	A	L	.	.	P	H	V	G	D	I	R	Q	L	G	F	M	C	G	A	E	L	V	R	S	K	E	T	K	E	P	Y	P	A	D	R	R	I	G	Y	K	V	S	L	K	M	R	E	L	G	M	L	T
Template Known Secondary structure								T	T																				T	T	S	.	.	T	T								T	T								S	B	T	T	T	T	B				G	G	G													T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	T	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R	V	S	V	E
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		R	P	L	G	.	.	.	D	V	I	A	F	L	P	P	L	A	S	T	A	E	E	L	S	E	M	V	A	I	M	K	Q	A	I	H	E	V	T	S	L	E	D
Template Known Secondary structure					T	.	.	.	T								T	T																						T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		410	.	.	.				.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.