Return to main results Retrieve Phyre Job Id

Job DescriptionP42588
Confidence34.50%DateThu Jan 5 12:01:35 GMT 2012
Rank337Aligned Residues44
% Identity14%Templatec3amlA_
PDB info PDB header:transferaseChain: A: PDB Molecule:os06g0726400 protein; PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   250.........260.........270.........280.........290...
Predicted Secondary structure 





















Query SS confidence 











































Query Sequence  PPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQP
Query Conservation      
  
  

   




 


 

 

 
   
    

 
Alig confidence 











































Template Conservation 
  


 


 

  

 





 

            
    
Template Sequence  TPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQN
Template Known Secondary structure 
TT


S
B


TTTSGGGG
SS

Template Predicted Secondary structure 

















Template SS confidence 











































   249250.........260.........270.........280.........290..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions