Job Description P42588 Confidence 99.95% Date Thu Jan 5 12:01:35 GMT 2012 Rank 66 Aligned Residues 355 % Identity 16% Template c2zc0C_ PDB info PDB header:transferase Chain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase Resolution 2.30 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																						.																																									.	.	.	.	.	.
Query SS confidence																						.																																									.	.	.	.	.	.
Query Sequence		T	Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	.	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	.	.	.	.	.	.	G	K	L	K	Y	S	F	F	C	N	S	G	T
Query Conservation																						.																																									.	.	.	.	.	.
Alig confidence														.	.							.																																									.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		K	K	G	V	K	L	I	S	L	A	A	G	.	.	D	P	D	P	E	L	I	P	R	A	V	L	G	E	I	A	K	E	V	L	E	K	E	P	K	S	V	M	Y	T	P	A	N	G	I	P	E	L	R	E	E	L	A	A	F	L	K	K	Y	D	H	L	E	V	S	P	E	N	I	V	I	T	I	G	G	T
Template Known Secondary structure		T	S	S						S				.	.				T	T	T	S																	G	G	G	G	S				T	T																	S						G	G	G
Template Predicted Secondary structure														.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D
Query Conservation
Alig confidence														.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	D	L	L	G	R	V	L	I	D	.	.	.	.	.	P	G	D	V	V	I	T	E	N	P	S	Y	I	N	T	L	L	A	F	E	Q	L	G	A	K	I	E	G	V	.	.	.	.	.	.	.	.	.	P	V	D	N	D	G	M	R	V	D	L	L	E	E	K	I	K	E	L	K	A	K	G	Q	K
Template Known Secondary structure														.	.	.	.	.	T	T								S											T	T	T							.	.	.	.	.	.	.	.	.				T	T																	T	T
Template Predicted Secondary structure														.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	.	.	.	.	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M
Query Conservation																																																							.	.	.	.
Alig confidence																																																							.	.	.	.
Template Conservation
Template Sequence		V	K	L	I	Y	T	I	P	T	G	Q	N	P	M	G	V	T	M	S	M	E	R	R	K	A	L	L	E	I	A	S	K	Y	D	L	L	I	I	E	D	T	A	Y	N	F	M	R	Y	E	G	G	D	I	V	P	L	K	A	L	D	N	E	G	R	V	I	V	A	G	T	L	S	K	V	L	G	T	G	F	R
Template Known Secondary structure										S	S		T	T	T																				T								T	T	T	T		B	S	S		S	S				G	G	G	G		S	S									S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		I	G	W	I	I	A	E	G	E	I	L	K	K	V	L	M	Q	K	Q	P	I	D	F	C	A	P	A	I	S	Q	Y	I	A	L	E	Y	L	K	R	G	Y	F	E	.	K	Y	H	L	E	G	A	L	L	G	Y	K	E	K	R	D	I	M	L	K	A	L	E	N	H	L	P	N	A	E	F	T	K	P	I	A
Template Known Secondary structure																				T	T	T	T	S	S	S														T	T				.			T	T	T	T																					S	S	S						S	B
Template Predicted Secondary structure																																													.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.							.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																										.											.	.	.	.	.	.
Query SS confidence																										.											.	.	.	.	.	.
Query Sequence		G	M	L	M	A	I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	.	R	V	L	V	A	G	T	L	N	N	.	.	.	.	.	.	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A
Query Conservation																										.											.	.	.	.	.	.
Alig confidence																										.											.	.	.	.	.	.										.
Template Conservation																																																				.
Template Sequence		G	M	F	V	M	F	F	L	P	E	G	A	D	G	I	S	F	A	N	E	L	M	E	R	E	G	V	V	V	V	P	G	K	P	F	Y	T	D	E	S	G	K	N	A	I	R	L	N	F	S	.	R	P	S	K	E	E	I	P	I	G	I	K	K	L	A	K	L	Y	K	E
Template Known Secondary structure		S	S							S	T	T													T	T					B			G	G	G		S	S	S			T	T							S	.	S	S		T	T															T
Template Predicted Secondary structure																																																				.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions