Job Description P42588 Confidence 99.82% Date Thu Jan 5 12:01:35 GMT 2012 Rank 193 Aligned Residues 330 % Identity 14% Template c2z61A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable aspartate aminotransferase 2; PDBTitle: crystal structure of mj0684 from methanococcus jannaschii2 reveals its similarity in the active site to kynurenine3 aminotransferases Resolution 2.20 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																						.	.																								.	.
Query SS confidence																																						.	.																								.	.
Query Sequence		Q	G	Q	E	F	I	D	C	L	G	G	F	G	I	F	N	V	G	H	R	N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	.	.	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	.	.	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E
Query Conservation																																						.	.																								.	.
Alig confidence													.	.							.																	.	.																								.	.
Template Conservation													.	.							.
Template Sequence		E	G	K	K	V	I	H	L	E	I	G	.	.	E	P	D	F	N	T	.	P	K	P	I	V	D	E	G	I	K	S	L	K	E	G	K	T	H	Y	T	D	S	R	G	I	L	E	L	R	E	K	I	S	E	L	Y	K	D	K	Y	K	A	D	I	I	P	D	N	I	I	I	T	G	G	S	S	L	G	L	F
Template Known Secondary structure		T	T										.	.	S		S	S			.														T	T			S				T	T																	S	S					G	G	G					S	S
Template Predicted Secondary structure													.	.							.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V
Query Conservation
Alig confidence										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		F	A	L	S	S	I	I	D	.	.	.	.	.	D	G	D	E	V	L	I	Q	N	P	C	Y	P	C	Y	K	N	F	I	R	F	L	G	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	F	C	D	F	T	V	E	S	L	E	E	A	L	S	.	.	.	.	.	.	D	K	T	K	A	I
Template Known Secondary structure										.	.	.	.	.	T	T							S	S			T									T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S										.	.	.	.	.	.	S	S
Template Predicted Secondary structure										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.															.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	.	.	.	A	K	A	L	G	G	G	V	M	P	I	G	A	T
Query Conservation																																																																	.	.	.
Alig confidence																.	.	.	.	.																																													.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		I	I	N	S	P	S	N	P	L	G	E	V	I	D	.	.	.	.	.	R	E	I	Y	E	F	A	Y	E	N	I	P	Y	I	I	S	D	E	I	Y	N	G	L	V	Y	E	G	K	C	Y	S	A	I	E	F	D	E	N	L	E	K	T	I	L	I	N	G	F	S	L	Y	A	M	T	G	W	R	I	G	Y	V
Template Known Secondary structure					S	S		T	T	T						.	.	.	.	.												S							T	T	T	T		B	S	S	S					G	G	G	T		T	T		S	S													G	G	G
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	E	E	V	F	S	V	L	F	D	N	P	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A
Query Conservation
Alig confidence														.	.	.																																																												.
Template Conservation														.	.	.																																																												.
Template Sequence		I	S	N	D	E	I	I	E	A	I	L	K	.	.	.	L	Q	Q	N	L	F	I	S	A	P	T	I	S	Q	Y	A	A	L	K	A	F	E	K	E	T	E	R	E	I	N	S	M	I	K	E	F	D	R	R	R	R	L	V	L	K	Y	V	K	D	F	G	W	E	V	N	N	P	I	G	.	A	Y	Y	V	F
Template Known Secondary structure														.	.	.						T	S	S	S									G	G	G	G	S																												T	T		B						B	.	T	T
Template Predicted Secondary structure														.	.	.																																																												.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.					.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		I	E	F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	R	V	L	V	A	G	T	.	.	.	.	L	N	N	A	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L
Query Conservation																												.	.	.	.
Alig confidence										.																		.	.	.	.													.	.
Template Conservation										.																																		.	.
Template Sequence		P	N	I	G	E	D	G	R	.	E	F	A	Y	K	L	L	K	E	K	F	V	A	L	T	P	G	I	G	F	G	S	K	G	K	N	Y	I	R	I	S	Y	A	.	.	N	S	Y	E	N	I	K	E	G	L	E	R	I	K	E	F	L
Template Known Secondary structure			B		S	S				.																	G	G	G	G		G	G	G	S	S	B							.	.	S
Template Predicted Secondary structure										.																																		.	.
Template SS confidence
		311	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions