 |
Job Description | P42588 | Confidence | 54.86% | Date | Thu Jan 5 12:01:35 GMT 2012 |
Rank | 285 | Aligned Residues | 54 |
% Identity | 11% | Template | c2qcnA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; |
PDBTitle: covalent complex of the orotidine-5'-monophosphate decarboxylase2 domain of human ump synthase with 6-iodo-ump
|
Resolution | 1.85 Å |
|
 |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | E | A | M | R | T | A | L | N | E | C | K | K | T | G | D | D | V | A | A | V | I | L | E | P | I | Q | G | E | G | G | V | I | L | P | P | P | G | Y | L | T | A | V | R | K | L | C | D | E | F | G | A | L | M | I | L | D |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   | . | . | . | . |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
D | V | S | L | A | R | E | L | L | Q | L | A | D | A | L | G | P | S | I | C | M | L | K | T | H | V | D | I | L | N | D | F | . |
. |
. |
. |
T | L | D | V | M | K | E | L | I | T | L | A | K | C | H | E | F | L | I | F | E | D |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S |  |  |  |  |
| G | G | G |
| T | T |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|