Job Description P42588 Confidence 99.88% Date Thu Jan 5 12:01:35 GMT 2012 Rank 135 Aligned Residues 323 % Identity 14% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G	A	F
Query Conservation
Alig confidence																						.	.	.															.	.																								.	.	.	.	.	.
Template Conservation																						.	.	.															.	.																								.	.	.	.	.	.
Template Sequence		A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	G	G	.	.	.	P	L	V	R	E	F	E	E	R	V	A	G	L	A	.	.	G	V	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	G	.	.	.	.	.	.	L	T	G	E	V	I	M	P	S	M	T	F
Template Known Secondary structure															T			S	S	S		.	.	.															.	.	T	S	S						S														T	.	.	.	.	.	.			S						S	S	S
Template Predicted Secondary structure																						.	.	.															.	.																								.	.	.	.	.	.
Template SS confidence
		2032	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.				.	.	.	.	.	.	.	.	2060	.	.	.	.	.			.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.							.	2090	.	.	.	.	.	.	.	.	.	2100
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R	K	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.															.	.	.	.	.	.								.	.	.											.	.	.	.
Template Conservation																								.	.	.	.	.	.	.															.	.	.	.	.	.								.	.	.											.	.	.	.
Template Sequence		A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	.	.	.	.	.	.	.	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	.	.	.	.	.	.	P	R	T	S	A	V	V	.	.	.	G	V	H	L	W	G	R	P	C	A	.	.	.	.	A	D	Q	L	R	K	V
Template Known Secondary structure		T									T	T								B		T	T	.	.	.	.	.	.	.	T	S	S	B		S	T	T							.	.	.	.	.	.	T	T						.	.	.				G	G	G					.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.															.	.	.	.	.	.								.	.	.											.	.	.	.
Template SS confidence
		2101	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.								.	.	.	.	.	.	.	2130	.	.	.	.	.	.							.	.	.	2140	.	.	.				.	.	.	.	.	.	2150	.	.	.					.	.	.	.	.	.	2160
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.												320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	.	.	.	.	.	.	.	.	.	.	.	S	V	L	F	D	N	P	F	L	H
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.								.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.								.
Template Sequence		A	D	E	H	G	L	R	L	Y	F	D	A	A	H	.	A	L	G	C	A	V	D	.	G	R	P	A	G	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G
Template Known Secondary structure						T								T	T	.		T	T				T	.	T			T	T	S	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T			T	T
Template Predicted Secondary structure																.								.
Template SS confidence
		2161	.	.	.	.	.	.	.	.	2170	.	.	.	.		.	.	.	.	.	2180	.		.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E	F	V	D	N	E	I	.	.	.	.	G	Y	N	F	A
Query Conservation																																																																									.	.	.	.
Alig confidence																								.	.																																																.	.	.	.
Template Conservation																								.	.
Template Sequence		G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	.	.	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G	I	H	R	D	L	V	M
Template Known Secondary structure				B		B																		.	.																	T		S		T	T						G	G	G	G	S	B																S	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		2239	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260			.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.																								.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	M	F	R	Q	R	V	L	V	A	G	T	L	N	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	I	R	I	E	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R	V	S	V	E	E	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																																																									.
Template Sequence		E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R	G	R	.	E	L	T	A	R
Template Known Secondary structure							T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T																			S			.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		2317	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.		.	.	2390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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