Job Description P42588 Confidence 99.88% Date Thu Jan 5 12:01:35 GMT 2012 Rank 136 Aligned Residues 326 % Identity 17% Template c2huuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine Resolution 2.10 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		N	P	V	V	V	S	A	V	Q	N	Q	L	A	K	Q	P	L	H	S	Q	E	L	L	D	P	L	R	A	M	L	A	K	T	L	A	A	L	T	P	.	G	K	L	K	Y	S	F	F	C	N	S	G	T	E	S	V	E	A	A	L	K	L	A	K	A	Y	Q	S	P	R	G	K	F	T	F	I	A	T	S	G
Query Conservation																																									.
Alig confidence														.	.									.																	.																								.	.	.	.					.
Template Conservation														.	.									.																																									.	.	.	.					.
Template Sequence		P	Q	R	V	L	D	A	M	S	R	P	I	.	.	L	G	H	L	H	P	E	T	.	L	K	I	M	D	D	I	K	E	G	V	R	Y	L	F	Q	T	N	N	I	A	T	F	C	L	S	A	S	G	H	G	G	M	E	A	T	L	C	N	L	.	.	.	.	L	E	D	G	.	D	V	I	L	I	G	H	T
Template Known Secondary structure									T	T	S			.	.			T	T	S				.																T				S						S	S														.	.	.	.			T	T	.								S
Template Predicted Secondary structure														.	.									.																																									.	.	.	.					.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.		.	.	.	.	.	100	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	H	G	K	S	L	G	A	L	S	A	T	A	K	S	T	F	R	K	P	F	M	P	L	L	P	G	F	R	H	V	P	F	G	N	I	E	A	M	R	T	A	L	N	E	C	K	K	T	G	D	D	V	A	A	V	I	L	E	P	I	Q	G	E	G	G	V	I	L	P	P	P	G	Y	L	T	A	V	R
Query Conservation
Alig confidence																							.	.	.	.	.	.																				.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.	.	.																				.	.	.	.	.																					.	.	.	.
Template Sequence		G	H	W	G	D	R	S	A	D	M	A	T	R	Y	G	A	D	V	R	V	V	.	.	.	.	.	.	K	S	K	V	G	Q	S	L	S	L	D	E	I	R	D	A	L	L	I	.	.	.	.	.	H	K	P	S	V	L	F	L	T	Q	G	D	S	S	T	G	V	L	Q	G	.	.	.	.	L	E	G	V	G
Template Known Secondary structure		S													T	T							.	.	.	.	.	.				T	T															.	.	.	.	.				S						S			T	T	T	T					.	.	.	.		T	T
Template Predicted Secondary structure																							.	.	.	.	.	.																				.	.	.	.	.																					.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	C	D	E	F	G	A	L	M	I	L	D	E	V	Q	T	G	M	G	R	T	G	K	M	F	A	C	E	H	E	N	V	Q	P	D	I	L	C	L	A	K	A	L	G	G	G	V	M	P	I	G	A	T	I	A	T	E	E	V	F	S	V	L	F	D	N	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		A	L	C	H	Q	H	N	C	L	L	I	V	D	T	V	A	S	L	G	.	.	.	.	.	G	A	P	M	F	M	D	R	W	E	I	D	A	M	Y	T	G	S	Q	V	L	G	A	P	P	G	I	T	P	V	S	F	S	H	R	A	V	E	R	Y	K	R	R	N	T	K	V	K	V	Y	Y	W	D	M	S	L
Template Known Secondary structure							T	T								T	T	T	B	T	.	.	.	.	.	T	B				T	T	T	T	T		S													S	S																T		S	S			S		G	G	G
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
														327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	L	H	T	T	T	F	G	G	N	P	L	A	C	A	A	A	L	A	T	I	N	V	L	L	E	Q	N	L	P	A	Q	A	E	Q	K	G	D	M	L	L	D	G	F	R	Q	L	A	R	E	Y	P	D	L	V	Q	E	A	R	G	K	G	M	L	M	A	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation																																																																	.	.
Template Sequence		V	G	D	Y	W	G	C	F	G	R	P	R	I	Y	H	H	T	I	S	S	T	L	L	Y	G	L	R	E	A	I	A	M	A	C	E	E	G	L	P	A	L	I	A	R	H	E	D	C	A	K	R	L	Y	R	G	L	Q	D	A	G	F	E	L	.	.	Y	A	D	P	K	D	R	L	S	T	V	T	T	I	K
Template Known Secondary structure						T	T		S	S	S					S																																												T	T			B	.	.	S	S		G	G	G	B		T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																			.										.	.									.
Query SS confidence																			.										.	.									.
Query Sequence		F	V	D	N	E	I	G	Y	N	F	A	S	E	M	F	R	Q	.	R	V	L	V	A	G	T	L	N	.	.	N	A	K	T	I	R	I	E	.	P	P	L	T	L	T	I	E	Q	C	E	L	V	I	K	A	A	R	K	A	L	A	A	M	R	V	S
Query Conservation																			.										.	.									.
Alig confidence																			.										.	.									.
Template Conservation
Template Sequence		V	P	Q	G	V	D	W	L	K	A	A	Q	Y	A	M	K	T	Y	L	V	E	I	S	G	G	L	G	P	T	A	G	Q	V	F	R	I	G	L	M	G	Q	N	A	T	T	E	R	V	D	R	V	L	Q	V	F	Q	E	A	V	A	A	V	K	P	A
Template Known Secondary structure				T	T																			B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions